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Copper in PDB 6piq: Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product G6 (Pyrazole 9)

Protein crystallography data

The structure of Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product G6 (Pyrazole 9), PDB code: 6piq was solved by O.V.Ilyichova, M.Bentley, B.Doak, M.J.Scanlon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.80 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.979, 64.426, 74.434, 90.00, 125.87, 90.00
R / Rfree (%) 21.5 / 26.7

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product G6 (Pyrazole 9) (pdb code 6piq). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product G6 (Pyrazole 9), PDB code: 6piq:

Copper binding site 1 out of 1 in 6piq

Go back to Copper Binding Sites List in 6piq
Copper binding site 1 out of 1 in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product G6 (Pyrazole 9)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product G6 (Pyrazole 9) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:71.7
occ:1.00
O B:ALA1 2.2 0.8 1.0
OE1 B:GLU4 2.4 84.7 1.0
O B:HOH364 2.4 80.9 1.0
N B:ALA1 3.0 82.1 1.0
C B:ALA1 3.2 99.9 1.0
CD B:GLU4 3.4 93.3 1.0
CA B:ALA1 3.7 80.3 1.0
CG B:GLU4 3.9 95.1 1.0
O B:HOH328 4.0 42.6 1.0
N B:GLN2 4.3 81.6 1.0
OE2 B:GLU4 4.5 90.3 1.0
CA B:GLN2 4.8 76.5 1.0
CB B:ALA1 4.8 82.3 1.0

Reference:

M.R.Bentley, O.V.Ilyichova, G.Wang, M.L.Williams, G.Sharma, W.S.Alwan, R.L.Whitehouse, B.Mohanty, P.J.Scammells, B.Heras, J.L.Martin, M.Totsika, B.Capuano, B.C.Doak, M.J.Scanlon. Rapid Elaboration of Fragments Into Leads By X-Ray Crystallographic Screening of Parallel Chemical Libraries (Refil X ). J.Med.Chem. V. 63 6863 2020.
ISSN: ISSN 0022-2623
PubMed: 32529824
DOI: 10.1021/ACS.JMEDCHEM.0C00111
Page generated: Wed Jul 31 06:44:47 2024

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