Atomistry » Copper » PDB 6l8s-6pvy » 6pgj
Atomistry »
  Copper »
    PDB 6l8s-6pvy »
      6pgj »

Copper in PDB 6pgj: Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7)

Protein crystallography data

The structure of Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7), PDB code: 6pgj was solved by O.V.Ilyichova, M.Bentley, B.Doak, M.J.Scanlon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.69 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.608, 64.827, 74.131, 90.00, 125.93, 90.00
R / Rfree (%) 19.3 / 22.6

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7) (pdb code 6pgj). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7), PDB code: 6pgj:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6pgj

Go back to Copper Binding Sites List in 6pgj
Copper binding site 1 out of 2 in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:0.1
occ:0.61
O B:ALA1 2.3 0.4 1.0
CB B:ALA1 2.5 0.8 1.0
CA B:ALA1 3.0 0.3 1.0
C B:ALA1 3.0 0.2 1.0
O B:HOH310 3.1 64.9 1.0
N B:ALA1 3.2 0.3 1.0
N B:GLN2 4.3 0.7 1.0
CU B:CU202 4.9 89.5 0.6

Copper binding site 2 out of 2 in 6pgj

Go back to Copper Binding Sites List in 6pgj
Copper binding site 2 out of 2 in the Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of Ecdsba in A Complex with Unpurified Reaction Product A5 (Morpholine Carboxylic Acid 7) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu202

b:89.5
occ:0.59
CA B:ALA1 2.4 0.3 1.0
N B:ALA1 2.4 0.3 1.0
CB B:ALA1 3.0 0.8 1.0
O B:HOH322 3.1 67.1 1.0
C B:ALA1 3.8 0.2 1.0
N B:GLN2 4.2 0.7 1.0
O B:ALA1 4.8 0.4 1.0
CU B:CU201 4.9 0.1 0.6

Reference:

M.Bentley, O.V.Ilyichova, B.Doak, M.J.Scanlon. Rapid Elaboration of Fragments Into Leads By X-Ray Crystallography (Refilx) To Be Published.
Page generated: Wed Jul 31 06:44:14 2024

Last articles

Cl in 4YA7
Cl in 4YAD
Cl in 4YA9
Cl in 4YA1
Cl in 4YA5
Cl in 4YA3
Cl in 4YA4
Cl in 4YA2
Cl in 4YA0
Cl in 4Y9Z
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy