Copper in PDB 6p1e: Cu-Bound PMOF1 Pcuac Domain (Dimer)

The structure of Cu-Bound PMOF1 Pcuac Domain (Dimer), PDB code: 6p1e was solved by O.S.Fisher, M.R.Sendzik, A.C.Rosenzweig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.94 / 1.61
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	55.407, 60.486, 76.836, 90.00, 90.00, 90.00
R / Rfree (%)	17.3 / 19.1

The binding sites of Copper atom in the Cu-Bound PMOF1 Pcuac Domain (Dimer) (pdb code 6p1e). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cu-Bound PMOF1 Pcuac Domain (Dimer), PDB code: 6p1e:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the Cu-Bound PMOF1 Pcuac Domain (Dimer)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cu-Bound PMOF1 Pcuac Domain (Dimer) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu203 b:17.3 occ:1.00 NE2 A:HIS64 2.0 12.2 1.0 NE2 B:HIS44 2.0 8.9 1.0 S A:SCN202 2.8 58.7 1.0 CE1 B:HIS44 2.9 9.0 1.0 CE1 A:HIS64 2.9 23.2 1.0 OE1 A:GLU43 2.9 45.9 1.0 CD2 A:HIS64 3.1 15.0 1.0 CD2 B:HIS44 3.2 8.4 1.0 O B:HOH306 3.4 28.9 1.0 CB A:PHE62 3.5 6.1 1.0 CD A:GLU43 3.7 58.3 1.0 CD2 B:HIS33 4.0 33.3 1.0 ND1 B:HIS44 4.0 11.7 1.0 ND1 A:HIS64 4.1 15.1 1.0 CG A:PHE62 4.1 6.7 1.0 CG A:HIS64 4.2 11.0 1.0 CG B:HIS44 4.2 7.4 1.0 OE2 A:GLU43 4.2 40.7 1.0 CB A:GLU43 4.4 8.8 1.0 CD1 A:PHE62 4.4 8.3 1.0 NE2 B:HIS33 4.4 51.0 1.0 C A:SCN202 4.5 30.4 1.0 O B:HOH347 4.5 37.8 1.0 CG A:GLU43 4.6 10.2 1.0 CA A:PHE62 4.8 5.9 1.0 C A:PHE62 4.9 8.2 1.0 CD2 A:PHE62 4.9 8.6 1.0

Copper binding site 2 out of 2 in the Cu-Bound PMOF1 Pcuac Domain (Dimer)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cu-Bound PMOF1 Pcuac Domain (Dimer) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu201 b:14.1 occ:1.00 NE2 B:HIS64 2.0 9.4 1.0 NE2 A:HIS44 2.1 8.5 1.0 O B:HOH330 2.8 26.7 1.0 OE1 B:GLU43 2.8 17.8 1.0 S A:SCN201 2.8 37.6 1.0 CE1 B:HIS64 2.9 14.2 1.0 CE1 A:HIS44 3.0 10.0 1.0 CD2 B:HIS64 3.1 14.5 1.0 CD2 A:HIS44 3.1 8.2 1.0 CB B:PHE62 3.4 8.7 1.0 CD B:GLU43 3.6 30.8 1.0 CG B:PHE62 4.0 9.3 1.0 ND1 B:HIS64 4.0 15.7 1.0 ND1 A:HIS44 4.1 7.5 1.0 CG B:HIS64 4.2 8.7 1.0 CG A:HIS44 4.2 6.8 1.0 CB B:GLU43 4.3 9.6 1.0 OE2 B:GLU43 4.3 19.8 1.0 CD1 B:PHE62 4.4 10.3 1.0 CG B:GLU43 4.4 9.7 1.0 C A:SCN201 4.6 5.9 1.0 CD2 B:PHE62 4.7 8.5 1.0 CA B:PHE62 4.7 7.7 1.0 O A:HOH354 4.8 16.0 1.0 O B:HOH311 4.9 33.1 1.0 O B:PHE62 4.9 10.2 1.0 C B:PHE62 4.9 8.0 1.0

O.S.Fisher, M.R.Sendzik, M.O.Ross, T.J.Lawton, B.M.Hoffman, A.C.Rosenzweig. Pcuac Domains From Methane-Oxidizing Bacteria Use A Histidine Brace to Bind Copper. J.Biol.Chem. V. 294 16351 2019.
ISSN: ESSN 1083-351X
PubMed: 31527086
DOI: 10.1074/JBC.RA119.010093