Atomistry » Copper » PDB 2idq-2pp7 » 2idq
Atomistry »
  Copper »
    PDB 2idq-2pp7 »
      2idq »

Copper in PDB 2idq: Structure of M98A Mutant of Amicyanin, Cu(II)

Protein crystallography data

The structure of Structure of M98A Mutant of Amicyanin, Cu(II), PDB code: 2idq was solved by C.J.Carrell, J.K.Ma, W.Antholine, J.P.Hosler, F.S.Mathews, V.L.Davidson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 0.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 28.570, 56.160, 26.970, 90.00, 96.63, 90.00
R / Rfree (%) 10.8 / 13

Copper Binding Sites:

The binding sites of Copper atom in the Structure of M98A Mutant of Amicyanin, Cu(II) (pdb code 2idq). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Structure of M98A Mutant of Amicyanin, Cu(II), PDB code: 2idq:

Copper binding site 1 out of 1 in 2idq

Go back to Copper Binding Sites List in 2idq
Copper binding site 1 out of 1 in the Structure of M98A Mutant of Amicyanin, Cu(II)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Structure of M98A Mutant of Amicyanin, Cu(II) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu107

b:7.5
occ:1.00
ND1 A:HIS53 1.9 7.3 1.0
ND1 A:HIS95 2.0 8.4 1.0
SG A:CYS92 2.1 8.0 1.0
O A:HOH264 2.4 34.3 1.0
CE1 A:HIS53 2.9 8.2 1.0
CE1 A:HIS95 3.0 10.1 1.0
CG A:HIS53 3.0 6.5 1.0
CG A:HIS95 3.1 7.8 1.0
CB A:CYS92 3.3 5.4 1.0
CB A:HIS95 3.4 7.1 1.0
CB A:HIS53 3.4 6.7 1.0
CA A:HIS53 3.6 5.3 1.0
O A:PRO52 3.7 7.8 1.0
NE2 A:HIS53 4.1 8.5 1.0
NE2 A:HIS95 4.1 11.6 1.0
CG A:PRO94 4.1 7.2 1.0
CD2 A:HIS53 4.1 7.2 1.0
CD2 A:HIS95 4.2 11.3 1.0
N A:HIS53 4.4 5.7 1.0
C A:PRO52 4.5 6.4 1.0
N A:HIS95 4.5 6.0 1.0
CA A:HIS95 4.5 6.4 1.0
N A:ASN54 4.5 5.2 1.0
C A:HIS53 4.6 5.4 1.0
CA A:CYS92 4.6 4.7 1.0
CD A:PRO94 4.7 6.3 1.0
C A:CYS92 5.0 5.2 1.0

Reference:

C.J.Carrell, J.K.Ma, W.E.Antholine, J.P.Hosler, F.S.Mathews, V.L.Davidson. Generation of Novel Copper Sites By Mutation of the Axial Ligand of Amicyanin. Atomic Resolution Structures and Spectroscopic Properties Biochemistry V. 46 1900 2007.
ISSN: ISSN 0006-2960
PubMed: 17295442
DOI: 10.1021/BI0619674
Page generated: Tue Jul 30 23:43:51 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy