Copper in PDB 9j9q: Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu)

All present enzymatic activity of Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu):
5.1.3.13;

The structure of Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu), PDB code: 9j9q was solved by W.J.Jeong, W.J.Song, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.36 / 2.49
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	42.467, 52.25, 55.88, 100.87, 100.39, 112.11
R / Rfree (%)	23.2 / 29

The binding sites of Copper atom in the Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu) (pdb code 9j9q). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu), PDB code: 9j9q:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu201 b:59.0 occ:1.00 ND1 A:HIS130 1.9 39.0 1.0 ND1 A:HIS54 2.3 29.0 1.0 CE1 A:HIS130 2.7 43.1 1.0 CG A:HIS130 3.0 35.2 1.0 CG A:HIS54 3.1 28.2 1.0 CB A:HIS54 3.3 25.4 1.0 CE1 A:HIS54 3.3 30.4 1.0 CB A:HIS130 3.5 31.0 1.0 NE2 A:HIS130 3.8 40.8 1.0 CD2 A:HIS130 3.9 37.9 1.0 CA A:HIS54 4.0 22.2 1.0 CA A:HIS130 4.0 27.6 1.0 NH2 A:ARG79 4.0 66.3 1.0 CD2 A:HIS54 4.3 28.4 1.0 NE2 A:HIS54 4.4 29.7 1.0 O A:CYS129 4.5 31.6 1.0 N A:HIS130 4.6 26.5 1.0 O A:SER53 4.7 21.0 1.0 N A:HIS54 4.8 22.0 1.0 C A:CYS129 4.8 28.6 1.0

Copper binding site 2 out of 2 in the Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Artificial Mononuclear Cu-Bound Metalloprotein 6 (M6:Cu) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu201 b:65.6 occ:1.00 ND1 B:HIS130 2.0 45.3 1.0 NH2 B:ARG79 2.3 55.3 1.0 ND1 B:HIS54 2.5 34.0 1.0 CE1 B:HIS130 2.8 47.4 1.0 CG B:HIS130 3.1 40.7 1.0 CZ B:ARG79 3.3 55.6 1.0 CG B:HIS54 3.4 31.2 1.0 CB B:HIS130 3.5 34.3 1.0 CB B:HIS54 3.5 27.2 1.0 CE1 B:HIS54 3.6 34.1 1.0 NH1 B:ARG79 3.7 58.4 1.0 NE2 B:HIS130 4.0 47.8 1.0 CA B:HIS130 4.1 30.0 1.0 CD2 B:HIS130 4.1 43.6 1.0 CA B:HIS54 4.1 25.3 1.0 NE B:ARG79 4.3 50.1 1.0 O B:CYS129 4.5 26.7 1.0 CD2 B:HIS54 4.5 33.5 1.0 N B:HIS130 4.6 30.5 1.0 NE2 B:HIS54 4.6 34.6 1.0 O B:SER53 4.7 25.4 1.0 C B:CYS129 4.8 30.0 1.0 N B:HIS54 4.9 24.1 1.0

W.J.Jeong, W.J.Song. Metal-Installer: A Protein Designer Tool to Create Metal-Binding Sites To Be Published.