Copper in PDB 8z5b: The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii

All present enzymatic activity of The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii:
1.16.3.4;

The structure of The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii, PDB code: 8z5b was solved by H.Qian, Y.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.02 / 1.40
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	74.59, 74.59, 230.946, 90, 90, 90
R / Rfree (%)	15.8 / 17.3

The structure of The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

The binding sites of Copper atom in the The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii (pdb code 8z5b). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii, PDB code: 8z5b:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu602 b:18.5 occ:0.20 NE2 A:HIS531 1.8 18.3 1.0 NE2 A:HIS464 2.0 15.6 1.0 NE2 A:HIS202 2.1 23.7 1.0 CE1 A:HIS531 2.7 17.0 1.0 CE1 A:HIS464 2.8 18.0 1.0 CD2 A:HIS531 2.9 17.2 1.0 CD2 A:HIS202 2.9 23.6 1.0 CE1 A:HIS202 3.1 19.1 1.0 CD2 A:HIS464 3.2 15.4 1.0 CD2 A:HIS462 3.5 14.5 1.0 O A:HOH896 3.8 23.6 1.0 ND1 A:HIS531 3.8 15.5 1.0 CD2 A:HIS152 3.9 14.2 1.0 CG A:HIS531 3.9 14.3 1.0 ND1 A:HIS464 4.0 17.5 1.0 NE2 A:HIS152 4.0 18.1 1.0 NE2 A:HIS462 4.1 18.1 1.0 CG A:HIS202 4.1 15.2 1.0 ND1 A:HIS202 4.2 27.4 1.0 CG A:HIS464 4.2 15.5 1.0 CG2 A:VAL529 4.3 19.4 1.0 CG A:HIS152 4.6 15.2 1.0 O A:HOH919 4.6 26.5 1.0 CG A:HIS462 4.6 14.5 1.0 CE1 A:HIS152 4.7 16.3 1.0 OE2 A:GLU538 4.7 26.4 1.0 MN A:MN601 4.8 12.9 0.7 CD2 A:HIS533 4.9 14.6 1.0 ND1 A:HIS152 4.9 15.3 1.0 NE2 A:HIS533 4.9 16.7 1.0

Copper binding site 2 out of 2 in the The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu603 b:10.2 occ:0.65 ND1 A:HIS537 2.0 17.0 1.0 ND1 A:HIS459 2.1 16.2 1.0 SG A:CYS532 2.2 15.2 1.0 CE1 A:HIS537 3.0 17.2 1.0 CE1 A:HIS459 3.0 16.7 1.0 CG A:HIS537 3.0 15.0 1.0 CG A:HIS459 3.1 16.6 1.0 CB A:CYS532 3.2 13.8 1.0 SD A:MET542 3.3 16.4 1.0 CB A:HIS537 3.4 15.0 1.0 CB A:HIS459 3.5 16.3 1.0 CD1 A:ILE534 3.8 14.6 1.0 CB A:ILE534 4.0 14.1 1.0 CA A:HIS459 4.1 16.1 1.0 NE2 A:HIS537 4.1 17.4 1.0 NE2 A:HIS459 4.1 18.4 1.0 CD2 A:HIS537 4.2 17.1 1.0 CD2 A:HIS459 4.2 18.6 1.0 CE A:MET542 4.2 22.1 1.0 CG1 A:ILE534 4.3 14.0 1.0 O A:HOH885 4.6 29.9 1.0 CD A:PRO460 4.6 14.8 1.0 CA A:CYS532 4.6 13.1 1.0 CG2 A:ILE534 4.7 14.6 1.0 N A:ILE534 4.8 11.6 1.0 CG A:MET542 4.8 18.7 1.0 CA A:HIS537 4.9 13.8 1.0 CA A:ILE534 5.0 13.1 1.0 O A:ALA458 5.0 19.5 1.0

Y.Wang, H.Qian. The X-Ray Crystal Structure of Multicopper Oxidase From Bacillus Freudenreichii To Be Published.