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Copper in PDB 8wqz: X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant

Protein crystallography data

The structure of X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant, PDB code: 8wqz was solved by A.Sugai, T.Yamaguchi, T.Kohzuma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.47 / 1.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 31.181, 53.014, 59.114, 90, 90, 90
R / Rfree (%) 13.1 / 15.3

Copper Binding Sites:

The binding sites of Copper atom in the X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant (pdb code 8wqz). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant, PDB code: 8wqz:

Copper binding site 1 out of 1 in 8wqz

Go back to Copper Binding Sites List in 8wqz
Copper binding site 1 out of 1 in the X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:7.0
occ:1.00
ND1 A:HIS40 2.0 6.6 1.0
ND1 A:HIS81 2.0 7.8 1.0
SG A:CYS78 2.2 7.1 1.0
SD A:MET86 2.5 7.2 1.0
CE1 A:HIS40 3.0 6.6 1.0
CE1 A:HIS81 3.0 8.9 1.0
CG A:HIS40 3.1 6.3 1.0
CG A:HIS81 3.1 8.8 1.0
CB A:CYS78 3.2 6.2 1.0
CE A:MET86 3.4 7.9 1.0
CB A:HIS81 3.4 9.0 1.0
CB A:HIS40 3.4 6.1 1.0
CA A:HIS40 3.7 6.1 1.0
CG A:MET86 3.9 6.7 1.0
NE2 A:HIS81 4.1 10.1 1.0
O A:GLY39 4.1 8.2 1.0
NE2 A:HIS40 4.1 7.3 1.0
CD2 A:HIS40 4.2 6.9 1.0
CD2 A:HIS81 4.2 10.1 1.0
CB A:MET86 4.4 6.5 1.0
O A:ALA15 4.5 9.6 1.0
N A:HIS40 4.5 6.6 1.0
C A:GLY39 4.6 7.6 1.0
CA A:CYS78 4.6 5.8 1.0
N A:HIS81 4.6 8.9 1.0
CA A:HIS81 4.6 9.4 1.0
CG A:PRO80 4.6 9.5 1.0
N A:ASN41 4.7 6.1 1.0
C A:HIS40 4.8 6.4 1.0

Reference:

A.Sugai, T.Yamaguchi, T.Kohzuma. X-Ray Crystal Structure of Pseudoazurin MET16GLY Variant To Be Published.
Page generated: Thu Oct 31 19:41:05 2024

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