Copper in PDB 8vqj: Cryoem Structure of Dpor Under Turnover

All present enzymatic activity of Cryoem Structure of Dpor Under Turnover:
1.3.7.7;

The structure of Cryoem Structure of Dpor Under Turnover also contains other interesting chemical elements:

Magnesium	(Mg)	4 atoms
Iron	(Fe)	12 atoms

The binding sites of Copper atom in the Cryoem Structure of Dpor Under Turnover (pdb code 8vqj). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cryoem Structure of Dpor Under Turnover, PDB code: 8vqj:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the Cryoem Structure of Dpor Under Turnover


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cryoem Structure of Dpor Under Turnover within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu602 b:124.7 occ:1.00 CU B:CU603 2.5 135.0 1.0 CE D:MET408 2.7 127.7 1.0 SD B:MET408 2.8 141.7 1.0 SD D:MET408 3.1 127.7 1.0 NE2 B:HIS404 3.2 119.2 1.0 CE B:MET408 3.2 141.7 1.0 CE1 B:HIS404 3.5 119.2 1.0 CD2 B:HIS404 4.5 119.2 1.0 CG B:MET408 4.5 141.7 1.0 NE2 D:HIS404 4.6 112.4 1.0 NH2 D:ARG360 4.8 110.8 1.0 ND1 B:HIS404 4.9 119.2 1.0 CG D:MET408 4.9 127.7 1.0 CD2 D:HIS404 4.9 112.4 1.0

Copper binding site 2 out of 2 in the Cryoem Structure of Dpor Under Turnover


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cryoem Structure of Dpor Under Turnover within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu603 b:135.0 occ:1.00 CU B:CU602 2.5 124.7 1.0 CE B:MET408 2.9 141.7 1.0 NE2 B:HIS404 3.0 119.2 1.0 CE D:MET408 3.1 127.7 1.0 SD D:MET408 3.4 127.7 1.0 SD B:MET408 3.5 141.7 1.0 CD2 B:HIS404 3.7 119.2 1.0 NH2 B:ARG360 4.0 117.5 1.0 CE1 B:HIS404 4.1 119.2 1.0 NH1 B:ARG360 4.3 117.5 1.0 NE2 D:HIS404 4.5 112.4 1.0 CZ B:ARG360 4.6 117.5 1.0 CG D:MET408 4.7 127.7 1.0 CG B:HIS404 4.9 119.2 1.0 CE1 D:HIS404 5.0 112.4 1.0

R.Kashyap, E.Antony. Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor To Be Published.