Atomistry » Copper » PDB 8s5x-8x7p » 8u1y
Atomistry »
  Copper »
    PDB 8s5x-8x7p »
      8u1y »

Copper in PDB 8u1y: E.Coli Dsba in Complex with N-(4-(Thiophen-3-Yl)Benzyl)Cyclohexanamine

Protein crystallography data

The structure of E.Coli Dsba in Complex with N-(4-(Thiophen-3-Yl)Benzyl)Cyclohexanamine, PDB code: 8u1y was solved by G.Wang, B.Heras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.41 / 1.74
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.724, 64.003, 74.333, 90, 125.12, 90
R / Rfree (%) 16.8 / 20.2

Copper Binding Sites:

The binding sites of Copper atom in the E.Coli Dsba in Complex with N-(4-(Thiophen-3-Yl)Benzyl)Cyclohexanamine (pdb code 8u1y). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the E.Coli Dsba in Complex with N-(4-(Thiophen-3-Yl)Benzyl)Cyclohexanamine, PDB code: 8u1y:

Copper binding site 1 out of 1 in 8u1y

Go back to Copper Binding Sites List in 8u1y
Copper binding site 1 out of 1 in the E.Coli Dsba in Complex with N-(4-(Thiophen-3-Yl)Benzyl)Cyclohexanamine


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of E.Coli Dsba in Complex with N-(4-(Thiophen-3-Yl)Benzyl)Cyclohexanamine within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:53.5
occ:1.00
OE1 B:GLU4 2.1 75.7 1.0
O B:ALA1 2.1 41.0 1.0
N B:ALA1 2.3 46.2 1.0
C B:ALA1 2.8 41.8 1.0
CA B:ALA1 3.0 48.9 1.0
CD B:GLU4 3.1 72.9 1.0
CG B:GLU4 3.4 57.6 1.0
CB B:ALA1 3.9 45.3 1.0
N B:GLN2 4.1 41.0 1.0
O B:HOH324 4.1 35.4 1.0
O B:HOH447 4.2 57.8 1.0
OE2 B:GLU4 4.2 72.6 1.0
CA B:GLN2 4.7 41.5 1.0
C B:GLN2 4.9 41.4 1.0
O B:GLN2 4.9 42.1 1.0
CB B:GLU4 4.9 49.5 1.0

Reference:

G.Wang, B.Heras. Two-Mode Inhibition of Dsba: Combination of Two Site-Specific Inhibitors Enhances Virulence Inhibition in Salmonella Enterica Serovar Typhimurium To Be Published.
Page generated: Sat Sep 28 19:55:58 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy