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Copper in PDB 7ntl: AA9 Lytic Polysaccharide Monooxygenase (Lpmo) From Malbranchea Cinnamomea

Protein crystallography data

The structure of AA9 Lytic Polysaccharide Monooxygenase (Lpmo) From Malbranchea Cinnamomea, PDB code: 7ntl was solved by S.Mazurkewich, A.Seveso, S.Huttner, G.Branden, L.Larsbrink, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.13 / 1.38
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 38.956, 43.128, 52.341, 90, 101.81, 90
R / Rfree (%) 16.1 / 19.3

Copper Binding Sites:

The binding sites of Copper atom in the AA9 Lytic Polysaccharide Monooxygenase (Lpmo) From Malbranchea Cinnamomea (pdb code 7ntl). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the AA9 Lytic Polysaccharide Monooxygenase (Lpmo) From Malbranchea Cinnamomea, PDB code: 7ntl:

Copper binding site 1 out of 1 in 7ntl

Go back to Copper Binding Sites List in 7ntl
Copper binding site 1 out of 1 in the AA9 Lytic Polysaccharide Monooxygenase (Lpmo) From Malbranchea Cinnamomea


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of AA9 Lytic Polysaccharide Monooxygenase (Lpmo) From Malbranchea Cinnamomea within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu301

b:15.8
occ:1.00
ND1 A:HIS1 1.9 15.7 1.0
NE2 A:HIS81 2.0 14.0 1.0
N A:HIS1 2.2 15.8 1.0
O A:HOH404 2.4 31.3 1.0
OH A:TYR169 2.8 15.2 1.0
CE1 A:HIS1 2.9 16.5 1.0
CD2 A:HIS81 2.9 14.3 1.0
CG A:HIS1 3.0 14.2 1.0
CE1 A:HIS81 3.0 14.3 1.0
CA A:HIS1 3.2 12.9 1.0
CB A:HIS1 3.3 15.8 1.0
CZ A:TYR169 3.8 13.2 1.0
OE1 A:GLN167 4.0 15.9 1.0
NE2 A:HIS1 4.0 15.5 1.0
ND1 A:HIS81 4.1 15.4 1.0
CG A:HIS81 4.1 13.3 1.0
CD2 A:HIS1 4.1 16.3 1.0
CE2 A:TYR169 4.3 14.5 1.0
C A:HIS1 4.5 17.2 1.0
CG A:PRO78 4.7 21.4 1.0
CE1 A:HIS158 4.9 16.4 1.0
CE1 A:TYR169 4.9 14.4 1.0
NE2 A:HIS158 4.9 14.9 1.0
O A:HIS1 4.9 18.3 1.0

Reference:

S.Mazurkewich, A.Seveso, S.Huttner, G.Branden, J.Larsbrink. Structure of A C1/C4-Oxidizing AA9 Lytic Polysaccharide Monooxygenase From the Thermophilic Fungus Malbranchea Cinnamomea Acta Crystallogr.,Sect.D 2021.
ISSN: ESSN 1399-0047
Page generated: Wed Jul 31 08:39:46 2024

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