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Copper in PDB 6utr: Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper

Protein crystallography data

The structure of Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper, PDB code: 6utr was solved by M.Fellner, K.Huizenga, R.P.Hausinger, J.Hu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.35 / 2.41
Space group P 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 108.978, 108.978, 323.690, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 25.4

Copper Binding Sites:

The binding sites of Copper atom in the Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper (pdb code 6utr). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper, PDB code: 6utr:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6utr

Go back to Copper Binding Sites List in 6utr
Copper binding site 1 out of 2 in the Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu302

b:66.3
occ:0.79
OD1 C:ASP231 2.1 64.0 1.0
OD2 A:ASP231 2.2 60.9 1.0
OD2 B:ASP231 2.3 62.2 1.0
O A:HOH421 2.4 50.4 0.8
OD2 C:ASP231 2.5 57.7 1.0
OD1 A:ASP231 2.6 54.3 1.0
CG C:ASP231 2.6 61.9 1.0
OD1 B:ASP231 2.7 57.5 1.0
CG A:ASP231 2.7 53.2 1.0
CG B:ASP231 2.8 59.0 1.0
O B:HOH403 3.8 55.8 1.0
O A:HOH412 4.0 58.0 1.0
CB C:ASP231 4.2 52.9 1.0
CB A:ASP231 4.2 55.2 1.0
CB B:ASP231 4.3 58.3 1.0
O B:ALA227 4.8 58.7 1.0
CA A:ASP231 4.9 48.0 1.0
O C:ALA227 4.9 53.6 1.0
CA C:ASP231 4.9 48.3 1.0
N A:ASP231 5.0 52.5 1.0

Copper binding site 2 out of 2 in 6utr

Go back to Copper Binding Sites List in 6utr
Copper binding site 2 out of 2 in the Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Lare, A Sulfur Transferase Involved in Synthesis of the Cofactor For Lactate Racemase in Complex with Copper within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu302

b:66.3
occ:0.76
OD1 F:ASP231 2.0 58.1 1.0
OD2 E:ASP231 2.1 63.8 1.0
OD1 D:ASP231 2.2 54.3 1.0
O D:HOH403 2.3 51.7 0.8
OD2 D:ASP231 2.4 57.0 1.0
OD1 E:ASP231 2.5 60.9 1.0
CG E:ASP231 2.6 60.1 1.0
OD2 F:ASP231 2.7 52.9 1.0
CG F:ASP231 2.7 54.5 1.0
CG D:ASP231 2.7 55.5 1.0
O E:HOH404 3.8 54.0 1.0
O D:HOH401 3.9 57.3 1.0
O E:HOH407 4.1 51.4 1.0
O E:HOH417 4.1 54.4 1.0
CB E:ASP231 4.1 58.3 1.0
CB F:ASP231 4.1 55.0 1.0
CB D:ASP231 4.2 57.1 1.0
O D:ALA227 4.7 53.1 1.0
O E:ALA227 4.8 51.9 1.0
CA F:ASP231 4.9 46.6 1.0
CA E:ASP231 4.9 49.5 1.0
N F:ASP231 4.9 56.0 1.0

Reference:

M.Fellner, M.Fellner, K.Huizenga, R.P.Hausinger, J.Hu. N/A N/A.
Page generated: Wed Jul 31 07:36:42 2024

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