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Copper in PDB 6iqy: High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Enzymatic activity of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
All present enzymatic activity of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared:
1.3.3.5;
1.3.3.5;
Protein crystallography data
The structure of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared, PDB code: 6iqy
was solved by
N.Shibata,
M.Akter,
Y.Higuchi,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 45.86 / 1.60 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 59.298, 152.253, 69.908, 90.00, 91.66, 90.00 |
| R / Rfree (%) | 19.1 / 22.5 |
Other elements in 6iqy:
The structure of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared also contains other interesting chemical elements:
| Calcium | (Ca) | 2 atoms |
Copper Binding Sites:
The binding sites of Copper atom in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
(pdb code 6iqy). This binding sites where shown within
5.0 Angstroms radius around Copper atom.
In total 8 binding sites of Copper where determined in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared, PDB code: 6iqy:
Jump to Copper binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Copper where determined in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared, PDB code: 6iqy:
Jump to Copper binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Copper binding site 1 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 1 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 1 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 2 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 2 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 2 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 3 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 3 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 3 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 4 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 4 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 4 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 5 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 5 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 5 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 6 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 6 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 6 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 7 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 7 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 7 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Copper binding site 8 out of 8 in 6iqy
Go back to
Copper Binding Sites List in 6iqy
Copper binding site 8 out
of 8 in the High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Copper with other atoms in the Cu binding
site number 8 of High Resolution Structure of Bilirubin Oxidase From Myrothecium Verrucaria - M467Q Mutant, Anaerobically Prepared within 5.0Å range:
|
Reference:
M.Akter,
T.Tokiwa,
M.Shoji,
K.Nishikawa,
Y.Shigeta,
T.Sakurai,
Y.Higuchi,
K.Kataoka,
N.Shibata.
Redox Potential-Dependent Formation of An Unusual His-Trp Bond in Bilirubin Oxidase. Chemistry V. 24 18052 2018.
ISSN: ISSN 1521-3765
PubMed: 30156345
DOI: 10.1002/CHEM.201803798
Page generated: Wed Jul 31 06:19:20 2024
ISSN: ISSN 1521-3765
PubMed: 30156345
DOI: 10.1002/CHEM.201803798
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