Atomistry » Copper » PDB 4ysu-5c92 » 4z0y
Atomistry »
  Copper »
    PDB 4ysu-5c92 »
      4z0y »

Copper in PDB 4z0y: Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1

Protein crystallography data

The structure of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1, PDB code: 4z0y was solved by C.Molitor, S.G.Mauracher, A.Rompel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.65 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 88.720, 90.560, 182.590, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 19.4

Copper Binding Sites:

The binding sites of Copper atom in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 (pdb code 4z0y). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 8 binding sites of Copper where determined in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1, PDB code: 4z0y:
Jump to Copper binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Copper binding site 1 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 1 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu601

b:18.9
occ:1.00
O A:HOH701 1.7 29.0 0.8
NE2 A:HIS125 1.9 15.4 1.0
NE2 A:HIS93 2.0 12.3 1.0
NE2 A:HIS116 2.1 12.6 1.0
O1 A:HIS252 2.7 24.9 0.5
CE1 A:HIS125 2.8 13.1 1.0
HE1 A:HIS125 2.9 15.8 1.0
CD2 A:HIS93 2.9 12.1 1.0
CE1 A:HIS93 3.0 13.2 1.0
CD2 A:HIS116 3.0 13.8 1.0
CE1 A:HIS116 3.1 12.1 1.0
CD2 A:HIS125 3.1 15.2 1.0
HD2 A:HIS93 3.1 14.5 1.0
HD2 A:HIS116 3.2 16.5 1.0
HE1 A:HIS93 3.2 15.8 1.0
HD2 A:HIS125 3.4 18.3 1.0
HD11 A:ILE115 3.5 16.4 1.0
SG A:CYS97 3.6 12.8 1.0
HZ A:PHE282 3.8 14.6 1.0
S A:HIS252 3.9 28.1 0.5
CU A:CU602 3.9 24.0 0.6
ND1 A:HIS125 4.0 14.1 1.0
ND1 A:HIS93 4.0 11.6 1.0
CG A:HIS93 4.0 10.9 1.0
HE1 A:PHE282 4.1 14.4 1.0
CG A:HIS125 4.1 14.7 1.0
ND1 A:HIS116 4.2 11.9 1.0
CG A:HIS116 4.2 12.5 1.0
NE2 A:HIS286 4.2 18.4 1.0
CD1 A:ILE115 4.2 13.7 1.0
HD12 A:ILE115 4.3 16.4 1.0
HE1 A:HIS286 4.3 20.2 1.0
HD1 A:PHE273 4.4 28.1 1.0
HD13 A:ILE115 4.4 16.4 1.0
HE1 A:PHE121 4.4 17.5 1.0
CE1 A:HIS286 4.5 16.9 1.0
O3 A:HIS252 4.5 27.6 0.5
O2 A:HIS252 4.5 36.3 0.5
HE2 A:PHE124 4.6 14.3 1.0
CZ A:PHE282 4.6 12.2 1.0
CD1 A:PHE273 4.7 23.4 1.0
HD1 A:HIS125 4.7 17.0 1.0
CE1 A:PHE282 4.7 12.0 1.0
HD2 A:PHE124 4.7 14.9 1.0
HD1 A:HIS93 4.8 13.9 1.0
HD1 A:PHE121 4.8 15.5 1.0
HB3 A:PHE273 4.9 20.5 1.0
HD1 A:HIS116 4.9 14.3 1.0
HE1 A:PHE273 4.9 32.0 1.0

Copper binding site 2 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 2 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu602

b:24.0
occ:0.55
O1 A:HIS252 1.9 24.9 0.5
S A:HIS252 2.0 28.1 0.5
NE2 A:HIS252 2.0 14.5 0.5
CE1 A:HIS252 2.1 14.1 0.5
NE2 A:HIS256 2.2 23.3 1.0
NE2 A:HIS286 2.2 18.4 1.0
NE2 A:HIS252 2.2 15.3 0.5
O3 A:HIS252 2.4 27.6 0.5
O A:HOH701 2.6 29.0 0.8
CE1 A:HIS252 3.0 15.4 0.5
CD2 A:HIS252 3.0 14.6 0.5
CE1 A:HIS256 3.0 21.1 1.0
CD2 A:HIS256 3.1 24.6 1.0
CD2 A:HIS286 3.1 18.3 1.0
HE1 A:PHE282 3.2 14.4 1.0
HE1 A:HIS252 3.2 18.4 0.5
CE1 A:HIS286 3.2 16.9 1.0
HE1 A:HIS256 3.2 25.3 1.0
HD2 A:HIS252 3.2 17.5 0.5
HD2 A:HIS286 3.3 21.9 1.0
HD2 A:HIS256 3.3 29.5 1.0
HE1 A:HIS286 3.4 20.2 1.0
ND1 A:HIS252 3.4 14.6 0.5
O2 A:HIS252 3.6 36.3 0.5
CD2 A:HIS252 3.6 15.4 0.5
HE1 A:PHE121 3.8 17.5 1.0
CU A:CU601 3.9 18.9 1.0
CE1 A:PHE282 4.0 12.0 1.0
ND1 A:HIS256 4.1 20.7 1.0
ND1 A:HIS252 4.1 15.0 0.5
CG A:HIS252 4.2 14.6 0.5
CG A:HIS252 4.2 14.7 0.5
CG A:HIS256 4.2 21.5 1.0
HD2 A:HIS285 4.2 17.6 1.0
HE1 A:HIS93 4.2 15.8 1.0
ND1 A:HIS286 4.3 18.8 1.0
CG A:HIS286 4.3 17.4 1.0
NE2 A:HIS125 4.4 15.4 1.0
NE2 A:HIS93 4.5 12.3 1.0
HD1 A:PHE282 4.5 17.3 1.0
HE2 A:HIS285 4.5 19.0 1.0
CE1 A:PHE121 4.7 14.6 1.0
HE1 A:PHE273 4.7 32.0 1.0
CE1 A:HIS93 4.7 13.2 1.0
CD1 A:PHE282 4.7 14.4 1.0
HD1 A:PHE273 4.7 28.1 1.0
HZ A:PHE282 4.7 14.6 1.0
HZ A:PHE121 4.7 18.3 1.0
CZ A:PHE282 4.8 12.2 1.0
HD2 A:HIS116 4.8 16.5 1.0
HD2 A:HIS125 4.8 18.3 1.0
CD2 A:HIS125 4.8 15.2 1.0
HD1 A:HIS256 4.8 24.9 1.0
CD2 A:HIS285 4.9 14.6 1.0
HD1 A:HIS252 4.9 18.0 0.5

Copper binding site 3 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 3 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu601

b:17.7
occ:1.00
NE2 B:HIS93 1.9 9.7 1.0
NE2 B:HIS125 2.0 8.7 1.0
NE2 B:HIS116 2.0 10.2 1.0
O B:HOH701 2.1 28.4 0.5
O2 B:HIS252 2.6 23.8 0.5
CE1 B:HIS125 2.8 10.3 1.0
CE1 B:HIS93 2.9 13.2 1.0
HE1 B:HIS125 2.9 12.3 1.0
CD2 B:HIS93 2.9 10.0 1.0
CD2 B:HIS116 3.0 12.7 1.0
CE1 B:HIS116 3.0 11.0 1.0
HE1 B:HIS93 3.1 15.8 1.0
CD2 B:HIS125 3.1 9.9 1.0
HD2 B:HIS93 3.2 12.0 1.0
HD2 B:HIS116 3.2 15.2 1.0
HD2 B:HIS125 3.4 11.9 1.0
HD11 B:ILE115 3.5 14.5 1.0
SG B:CYS97 3.6 11.9 1.0
S B:HIS252 3.7 25.6 0.5
CU B:CU602 3.9 23.5 0.6
HZ B:PHE282 4.0 16.7 1.0
ND1 B:HIS93 4.0 11.9 1.0
ND1 B:HIS125 4.0 9.8 1.0
CG B:HIS93 4.0 9.9 1.0
HE1 B:PHE282 4.1 16.5 1.0
NE2 B:HIS286 4.1 19.2 1.0
ND1 B:HIS116 4.1 12.4 1.0
CG B:HIS116 4.1 11.3 1.0
CG B:HIS125 4.2 9.4 1.0
HE1 B:HIS286 4.2 19.8 1.0
HD1 B:PHE273 4.2 26.7 1.0
O1 B:HIS252 4.2 32.1 0.5
CD1 B:ILE115 4.3 12.1 1.0
HE1 B:PHE121 4.3 14.8 1.0
HD12 B:ILE115 4.3 14.5 1.0
CE1 B:HIS286 4.4 16.5 1.0
O3 B:HIS252 4.4 27.2 0.5
HD13 B:ILE115 4.5 14.5 1.0
HE2 B:PHE124 4.5 12.4 1.0
CD1 B:PHE273 4.5 22.3 1.0
CZ B:PHE282 4.7 13.9 1.0
HD2 B:PHE124 4.7 12.0 1.0
CE1 B:PHE282 4.7 13.8 1.0
HD1 B:HIS125 4.7 11.7 1.0
HD1 B:HIS93 4.7 14.3 1.0
HE1 B:PHE273 4.8 31.1 1.0
HD1 B:PHE121 4.9 14.9 1.0
CE1 B:PHE273 4.9 25.9 1.0
HB3 B:PHE273 4.9 22.3 1.0
HD1 B:HIS116 4.9 14.8 1.0

Copper binding site 4 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 4 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu602

b:23.5
occ:0.64
O2 B:HIS252 1.9 23.8 0.5
NE2 B:HIS252 2.0 10.7 0.5
S B:HIS252 2.0 25.6 0.5
CE1 B:HIS252 2.0 11.0 0.5
NE2 B:HIS286 2.1 19.2 1.0
NE2 B:HIS252 2.2 10.7 0.5
O B:HOH701 2.2 28.4 0.5
NE2 B:HIS256 2.2 18.3 1.0
O3 B:HIS252 2.4 27.2 0.5
CD2 B:HIS252 3.0 11.2 0.5
CE1 B:HIS252 3.0 11.4 0.5
CE1 B:HIS256 3.0 17.5 1.0
CD2 B:HIS286 3.1 18.1 1.0
CD2 B:HIS256 3.1 19.7 1.0
HD2 B:HIS252 3.1 13.4 0.5
CE1 B:HIS286 3.1 16.5 1.0
HE1 B:PHE282 3.2 16.5 1.0
HE1 B:HIS252 3.2 13.7 0.5
HD2 B:HIS286 3.2 21.7 1.0
HE1 B:HIS256 3.2 21.0 1.0
HD2 B:HIS256 3.3 23.7 1.0
HE1 B:HIS286 3.3 19.8 1.0
ND1 B:HIS252 3.4 11.4 0.5
CD2 B:HIS252 3.6 12.1 0.5
O1 B:HIS252 3.6 32.1 0.5
CU B:CU601 3.9 17.7 1.0
HE1 B:PHE121 3.9 14.8 1.0
CE1 B:PHE282 4.0 13.8 1.0
ND1 B:HIS252 4.1 12.2 0.5
ND1 B:HIS256 4.1 16.6 1.0
CG B:HIS252 4.1 11.8 0.5
CG B:HIS252 4.1 11.8 0.5
HD2 B:HIS285 4.1 16.6 1.0
CG B:HIS256 4.1 17.4 1.0
HE1 B:HIS93 4.2 15.8 1.0
CG B:HIS286 4.2 14.4 1.0
ND1 B:HIS286 4.2 17.4 1.0
HD1 B:PHE282 4.5 15.4 1.0
HE2 B:HIS285 4.5 17.5 1.0
NE2 B:HIS93 4.5 9.7 1.0
NE2 B:HIS125 4.5 8.7 1.0
HE1 B:PHE273 4.6 31.1 1.0
HZ B:PHE121 4.6 14.8 1.0
HD1 B:PHE273 4.6 26.7 1.0
CE1 B:HIS93 4.6 13.2 1.0
CD1 B:PHE282 4.7 12.8 1.0
CE1 B:PHE121 4.7 12.3 1.0
CD2 B:HIS285 4.8 13.8 1.0
HD1 B:HIS256 4.8 20.0 1.0
HZ B:PHE282 4.8 16.7 1.0
HD1 B:HIS252 4.9 14.6 0.5
HD2 B:HIS116 4.9 15.2 1.0
CZ B:PHE282 4.9 13.9 1.0
HD2 B:HIS125 4.9 11.9 1.0
CD2 B:HIS125 4.9 9.9 1.0
NE2 B:HIS285 5.0 14.6 1.0

Copper binding site 5 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 5 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 5 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cu601

b:16.3
occ:1.00
O C:HOH701 1.8 28.7 0.5
NE2 C:HIS93 1.9 10.0 1.0
NE2 C:HIS125 2.0 9.7 1.0
NE2 C:HIS116 2.0 8.6 1.0
O1 C:HIS252 2.6 23.2 0.5
CE1 C:HIS125 2.7 11.6 1.0
HE1 C:HIS125 2.8 13.9 1.0
CD2 C:HIS93 2.9 10.8 1.0
CE1 C:HIS93 2.9 11.6 1.0
CD2 C:HIS116 3.0 9.9 1.0
CE1 C:HIS116 3.0 9.0 1.0
HD2 C:HIS93 3.1 12.9 1.0
CD2 C:HIS125 3.1 11.0 1.0
HD2 C:HIS116 3.2 11.8 1.0
HE1 C:HIS93 3.2 13.9 1.0
HD11 C:ILE115 3.4 12.2 1.0
HD2 C:HIS125 3.5 13.2 1.0
SG C:CYS97 3.5 10.4 1.0
S C:HIS252 3.7 22.0 0.5
HZ C:PHE282 3.9 14.1 1.0
CU C:CU602 3.9 23.6 0.6
ND1 C:HIS125 3.9 12.8 1.0
ND1 C:HIS93 4.0 12.0 1.0
CG C:HIS93 4.0 9.8 1.0
HE1 C:PHE282 4.1 13.1 1.0
ND1 C:HIS116 4.1 9.9 1.0
CG C:HIS116 4.1 9.3 1.0
CG C:HIS125 4.2 10.7 1.0
CD1 C:ILE115 4.2 10.1 1.0
NE2 C:HIS286 4.2 19.9 1.0
O2 C:HIS252 4.2 36.9 0.5
HD12 C:ILE115 4.3 12.2 1.0
O3 C:HIS252 4.3 20.2 0.5
HD13 C:ILE115 4.3 12.2 1.0
HE1 C:PHE121 4.3 13.7 1.0
HE1 C:HIS286 4.4 20.5 1.0
HD1 C:PHE273 4.4 21.8 1.0
HE2 C:PHE124 4.5 11.8 1.0
CE1 C:HIS286 4.5 17.1 1.0
CD1 C:PHE273 4.6 18.2 1.0
CZ C:PHE282 4.6 11.7 1.0
HD1 C:HIS125 4.7 15.4 1.0
HD2 C:PHE124 4.7 11.9 1.0
CE1 C:PHE282 4.7 10.9 1.0
HD1 C:HIS93 4.8 14.3 1.0
HD1 C:PHE121 4.8 14.3 1.0
HB3 C:PHE273 4.9 14.2 1.0
HD1 C:HIS116 4.9 11.8 1.0
CE1 C:PHE273 4.9 22.2 1.0
HE1 C:PHE273 4.9 26.7 1.0

Copper binding site 6 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 6 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 6 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cu602

b:23.6
occ:0.55
O1 C:HIS252 1.9 23.2 0.5
S C:HIS252 1.9 22.0 0.5
NE2 C:HIS252 2.0 11.3 0.5
CE1 C:HIS252 2.1 12.1 0.5
NE2 C:HIS252 2.2 11.4 0.5
NE2 C:HIS286 2.2 19.9 1.0
O3 C:HIS252 2.2 20.2 0.5
NE2 C:HIS256 2.3 25.9 1.0
O C:HOH701 2.6 28.7 0.5
CD2 C:HIS252 3.0 12.6 0.5
CE1 C:HIS252 3.0 11.5 0.5
CE1 C:HIS256 3.0 21.9 1.0
CD2 C:HIS286 3.0 17.2 1.0
HE1 C:PHE282 3.1 13.1 1.0
HD2 C:HIS286 3.1 20.7 1.0
HE1 C:HIS256 3.2 26.3 1.0
HD2 C:HIS252 3.2 15.1 0.5
HE1 C:HIS252 3.2 13.8 0.5
CD2 C:HIS256 3.3 22.1 1.0
CE1 C:HIS286 3.3 17.1 1.0
ND1 C:HIS252 3.5 13.1 0.5
O2 C:HIS252 3.5 36.9 0.5
HD2 C:HIS256 3.5 26.5 1.0
CD2 C:HIS252 3.6 12.3 0.5
HE1 C:HIS286 3.6 20.5 1.0
CE1 C:PHE282 3.9 10.9 1.0
HE1 C:PHE121 3.9 13.7 1.0
CU C:CU601 3.9 16.3 1.0
ND1 C:HIS256 4.0 18.5 1.0
ND1 C:HIS252 4.1 12.5 0.5
CG C:HIS252 4.1 12.5 0.5
CG C:HIS252 4.2 12.5 0.5
HE1 C:HIS93 4.2 13.9 1.0
CG C:HIS256 4.2 16.8 1.0
HD2 C:HIS285 4.2 17.6 1.0
CG C:HIS286 4.2 14.9 1.0
ND1 C:HIS286 4.3 15.9 1.0
HD1 C:PHE282 4.4 12.7 1.0
NE2 C:HIS93 4.4 10.0 1.0
NE2 C:HIS125 4.5 9.7 1.0
HE1 C:PHE273 4.5 26.7 1.0
HE2 C:HIS285 4.5 20.1 1.0
CD1 C:PHE282 4.6 10.6 1.0
CE1 C:HIS93 4.6 11.6 1.0
HD1 C:PHE273 4.6 21.8 1.0
HZ C:PHE282 4.6 14.1 1.0
CZ C:PHE282 4.7 11.7 1.0
HZ C:PHE121 4.7 15.1 1.0
HD1 C:HIS256 4.7 22.2 1.0
CE1 C:PHE121 4.8 11.4 1.0
HD1 C:HIS252 4.9 14.9 0.5
CD2 C:HIS285 4.9 14.7 1.0
HD2 C:HIS116 4.9 11.8 1.0
CD2 C:HIS125 4.9 11.0 1.0
HD2 C:HIS125 4.9 13.2 1.0

Copper binding site 7 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 7 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 7 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu601

b:14.8
occ:1.00
NE2 D:HIS93 1.9 8.5 1.0
NE2 D:HIS125 2.0 9.7 1.0
NE2 D:HIS116 2.0 8.4 1.0
O D:HOH701 2.1 28.9 0.5
O1 D:HIS252 2.6 25.4 0.5
CE1 D:HIS125 2.9 10.0 1.0
CD2 D:HIS93 2.9 10.1 1.0
CE1 D:HIS93 2.9 9.6 1.0
HE1 D:HIS125 3.0 12.0 1.0
CE1 D:HIS116 3.0 9.1 1.0
CD2 D:HIS116 3.0 10.4 1.0
HD2 D:HIS93 3.1 12.1 1.0
CD2 D:HIS125 3.1 11.2 1.0
HE1 D:HIS93 3.1 11.5 1.0
HD2 D:HIS116 3.2 12.5 1.0
HD2 D:HIS125 3.4 13.5 1.0
HD11 D:ILE115 3.4 12.5 1.0
SG D:CYS97 3.5 8.7 1.0
S D:HIS252 3.7 22.1 0.5
HZ D:PHE282 3.9 13.6 1.0
CU D:CU602 3.9 22.3 0.6
ND1 D:HIS93 4.0 10.8 1.0
CG D:HIS93 4.0 8.3 1.0
ND1 D:HIS125 4.0 10.1 1.0
HE1 D:PHE282 4.1 13.1 1.0
ND1 D:HIS116 4.1 7.7 1.0
NE2 D:HIS286 4.1 19.4 1.0
HE1 D:HIS286 4.1 19.1 1.0
CG D:HIS116 4.2 8.1 1.0
CD1 D:ILE115 4.2 10.4 1.0
CG D:HIS125 4.2 8.7 1.0
O2 D:HIS252 4.2 30.2 0.5
HD12 D:ILE115 4.3 12.5 1.0
HE1 D:PHE121 4.3 10.0 1.0
HD13 D:ILE115 4.3 12.5 1.0
HD1 D:PHE273 4.4 18.8 1.0
O3 D:HIS252 4.4 22.1 0.5
CE1 D:HIS286 4.4 15.9 1.0
HE2 D:PHE124 4.6 13.4 1.0
CZ D:PHE282 4.6 11.3 1.0
CD1 D:PHE273 4.6 15.7 1.0
HD2 D:PHE124 4.7 13.0 1.0
CE1 D:PHE282 4.7 10.9 1.0
HD1 D:HIS93 4.8 13.0 1.0
HD1 D:HIS125 4.8 12.1 1.0
HB3 D:PHE273 4.8 12.7 1.0
HD1 D:PHE121 4.8 12.7 1.0
HD1 D:HIS116 4.9 9.2 1.0
HE1 D:PHE273 4.9 21.6 1.0
CE1 D:PHE273 5.0 18.0 1.0

Copper binding site 8 out of 8 in 4z0y

Go back to Copper Binding Sites List in 4z0y
Copper binding site 8 out of 8 in the Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 8 of Active Aurone Synthase (Polyphenol Oxidase), Copper B : Sulfohistidine ~ 1.4 : 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu602

b:22.3
occ:0.61
O1 D:HIS252 1.9 25.4 0.5
S D:HIS252 2.0 22.1 0.5
NE2 D:HIS286 2.1 19.4 1.0
CE1 D:HIS252 2.1 10.2 0.5
NE2 D:HIS252 2.1 9.6 0.5
NE2 D:HIS252 2.1 9.6 0.5
NE2 D:HIS256 2.2 20.8 1.0
O D:HOH701 2.3 28.9 0.5
O3 D:HIS252 2.4 22.1 0.5
CE1 D:HIS286 3.0 15.9 1.0
CE1 D:HIS256 3.0 20.0 1.0
CD2 D:HIS252 3.0 10.5 0.5
CD2 D:HIS286 3.0 18.9 1.0
HE1 D:PHE282 3.0 13.1 1.0
CD2 D:HIS256 3.1 20.5 1.0
CE1 D:HIS252 3.1 9.1 0.5
HD2 D:HIS252 3.1 12.6 0.5
HE1 D:HIS256 3.2 24.0 1.0
HE1 D:HIS286 3.2 19.1 1.0
HD2 D:HIS286 3.2 22.6 1.0
HE1 D:HIS252 3.4 11.0 0.5
HD2 D:HIS256 3.4 24.6 1.0
ND1 D:HIS252 3.4 10.0 0.5
CD2 D:HIS252 3.6 10.0 0.5
O2 D:HIS252 3.6 30.2 0.5
CE1 D:PHE282 3.9 10.9 1.0
HE1 D:PHE121 3.9 10.0 1.0
CU D:CU601 3.9 14.8 1.0
ND1 D:HIS256 4.0 16.8 1.0
ND1 D:HIS286 4.1 16.1 1.0
CG D:HIS256 4.1 15.2 1.0
HD2 D:HIS285 4.1 15.1 1.0
CG D:HIS252 4.1 10.4 0.5
CG D:HIS286 4.1 16.3 1.0
CG D:HIS252 4.2 10.4 0.5
ND1 D:HIS252 4.2 10.1 0.5
HE1 D:HIS93 4.3 11.5 1.0
HD1 D:PHE282 4.4 13.8 1.0
NE2 D:HIS93 4.5 8.5 1.0
NE2 D:HIS125 4.5 9.7 1.0
CD1 D:PHE282 4.6 11.5 1.0
HE2 D:HIS285 4.6 14.9 1.0
HZ D:PHE282 4.6 13.6 1.0
HZ D:PHE121 4.7 12.9 1.0
CE1 D:HIS93 4.7 9.6 1.0
HD1 D:PHE273 4.7 18.8 1.0
CZ D:PHE282 4.7 11.3 1.0
HD1 D:HIS256 4.7 20.2 1.0
CE1 D:PHE121 4.7 8.3 1.0
HE1 D:PHE273 4.8 21.6 1.0
CD2 D:HIS285 4.8 12.6 1.0
HD1 D:HIS286 4.9 19.3 1.0
HD2 D:HIS125 4.9 13.5 1.0
CD2 D:HIS125 4.9 11.2 1.0
HD2 D:HIS116 4.9 12.5 1.0
O D:HOH959 4.9 33.0 1.0
HD1 D:HIS252 5.0 12.2 0.5

Reference:

C.Molitor, S.G.Mauracher, A.Rompel. Aurone Synthase Is A Catechol Oxidase with Hydroxylase Activity and Provides Insights Into the Mechanism of Plant Polyphenol Oxidases. Proc.Natl.Acad.Sci.Usa V. 113 E1806 2016.
ISSN: ESSN 1091-6490
PubMed: 26976571
DOI: 10.1073/PNAS.1523575113
Page generated: Mon Jul 14 04:15:56 2025

Last articles

Mg in 4DV3
Mg in 4DV2
Mg in 4DV0
Mg in 4DV1
Mg in 4DUZ
Mg in 4DUY
Mg in 4DR7
Mg in 4DR6
Mg in 4DR5
Mg in 4DUX
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy