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Copper in PDB 4ko7: Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I)

Protein crystallography data

The structure of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I), PDB code: 4ko7 was solved by K.K.Inampudi, W.Meng, P.H.Tobin, C.J.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.29 / 2.07
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.953, 84.750, 113.109, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 26.6

Copper Binding Sites:

The binding sites of Copper atom in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I) (pdb code 4ko7). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 4 binding sites of Copper where determined in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I), PDB code: 4ko7:
Jump to Copper binding site number: 1; 2; 3; 4;

Copper binding site 1 out of 4 in 4ko7

Go back to Copper Binding Sites List in 4ko7
Copper binding site 1 out of 4 in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:21.0
occ:1.00
ND1 A:HIS46 1.9 18.9 1.0
ND1 A:HIS117 2.0 23.3 1.0
SG A:CYS112 2.2 21.7 1.0
O A:GLY45 2.7 23.8 1.0
CE1 A:HIS46 2.8 19.7 1.0
CE1 A:HIS117 2.9 21.2 1.0
CG A:HIS46 3.0 20.5 1.0
CG A:HIS117 3.0 23.3 1.0
SD A:MET121 3.1 23.4 1.0
CB A:CYS112 3.2 19.8 1.0
CA A:HIS46 3.3 20.9 1.0
CB A:HIS117 3.4 22.7 1.0
CB A:HIS46 3.5 20.7 1.0
C A:GLY45 3.6 21.8 1.0
N A:HIS46 3.9 21.6 1.0
CB A:PHE114 3.9 19.5 1.0
CE A:MET121 4.0 21.9 1.0
NE2 A:HIS46 4.0 22.2 1.0
NE2 A:HIS117 4.1 23.7 1.0
CD2 A:HIS46 4.1 21.4 1.0
CD2 A:HIS117 4.1 24.2 1.0
C A:HIS46 4.5 21.1 1.0
CG A:MET121 4.6 21.2 1.0
N A:ASN47 4.6 20.0 1.0
CA A:CYS112 4.7 19.8 1.0
CG A:PHE114 4.7 18.6 1.0
N A:PHE114 4.9 19.4 1.0
CA A:HIS117 4.9 21.9 1.0
CA A:PHE114 5.0 18.1 1.0
O A:MET44 5.0 23.9 1.0
CB A:MET121 5.0 22.3 1.0

Copper binding site 2 out of 4 in 4ko7

Go back to Copper Binding Sites List in 4ko7
Copper binding site 2 out of 4 in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:28.9
occ:1.00
ND1 B:HIS46 2.0 21.3 1.0
ND1 B:HIS117 2.1 23.8 1.0
SG B:CYS112 2.2 26.0 1.0
O B:GLY45 2.6 21.1 1.0
CE1 B:HIS46 2.9 22.9 1.0
CE1 B:HIS117 3.0 25.8 1.0
CG B:HIS46 3.1 21.2 1.0
CG B:HIS117 3.2 25.6 1.0
CB B:CYS112 3.2 24.8 1.0
CA B:HIS46 3.2 19.3 1.0
SD B:MET121 3.3 25.8 1.0
CB B:HIS46 3.5 20.4 1.0
CB B:HIS117 3.5 26.5 1.0
C B:GLY45 3.5 23.2 1.0
CE B:MET121 3.7 28.4 1.0
N B:HIS46 3.8 21.0 1.0
CB B:PHE114 3.8 23.0 1.0
NE2 B:HIS46 4.1 20.4 1.0
CD2 B:HIS46 4.1 22.7 1.0
NE2 B:HIS117 4.2 26.9 1.0
CD2 B:HIS117 4.2 25.3 1.0
C B:HIS46 4.5 18.3 1.0
CA B:CYS112 4.6 23.7 1.0
N B:ASN47 4.6 17.4 1.0
CG B:PHE114 4.7 25.7 1.0
CG B:MET121 4.7 24.8 1.0
N B:PHE114 4.9 20.1 1.0
CA B:PHE114 4.9 23.1 1.0
CA B:GLY45 4.9 24.7 1.0
CA B:HIS117 5.0 25.9 1.0

Copper binding site 3 out of 4 in 4ko7

Go back to Copper Binding Sites List in 4ko7
Copper binding site 3 out of 4 in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I) within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cu201

b:20.8
occ:1.00
ND1 C:HIS46 2.1 18.5 1.0
SG C:CYS112 2.1 19.7 1.0
ND1 C:HIS117 2.1 19.7 1.0
O C:GLY45 2.9 21.7 1.0
CE1 C:HIS46 3.0 18.4 1.0
CE1 C:HIS117 3.1 19.8 1.0
CG C:HIS46 3.1 18.9 1.0
CG C:HIS117 3.1 19.0 1.0
SD C:MET121 3.1 22.9 1.0
CB C:CYS112 3.2 17.1 1.0
CA C:HIS46 3.3 20.1 1.0
CB C:HIS46 3.4 19.7 1.0
CB C:HIS117 3.5 20.0 1.0
C C:GLY45 3.7 21.4 1.0
CE C:MET121 3.8 22.0 1.0
CB C:PHE114 3.9 19.7 1.0
N C:HIS46 3.9 21.0 1.0
NE2 C:HIS46 4.1 19.0 1.0
NE2 C:HIS117 4.2 18.7 1.0
CD2 C:HIS46 4.2 19.5 1.0
CD2 C:HIS117 4.2 19.5 1.0
C C:HIS46 4.5 19.0 1.0
N C:ASN47 4.5 16.9 1.0
CA C:CYS112 4.6 16.2 1.0
CG C:MET121 4.7 22.2 1.0
CG C:PHE114 4.7 19.9 1.0
CB C:MET121 4.9 22.6 1.0
CA C:HIS117 4.9 20.6 1.0
N C:PHE114 5.0 17.6 1.0
CA C:PHE114 5.0 19.3 1.0

Copper binding site 4 out of 4 in 4ko7

Go back to Copper Binding Sites List in 4ko7
Copper binding site 4 out of 4 in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu201

b:20.9
occ:1.00
ND1 D:HIS117 1.9 26.4 1.0
SG D:CYS112 2.1 19.1 1.0
ND1 D:HIS46 2.1 21.1 1.0
O D:GLY45 2.6 23.0 1.0
CE1 D:HIS117 2.9 26.2 1.0
CG D:HIS117 3.0 22.9 1.0
CE1 D:HIS46 3.0 20.2 1.0
CG D:HIS46 3.2 19.5 1.0
CB D:CYS112 3.2 19.3 1.0
SD D:MET121 3.2 18.2 1.0
CA D:HIS46 3.3 19.4 1.0
CB D:HIS117 3.4 23.8 1.0
CB D:HIS46 3.6 18.5 1.0
C D:GLY45 3.6 19.4 1.0
CE D:MET121 3.8 18.8 1.0
N D:HIS46 3.9 19.1 1.0
CB D:PHE114 3.9 20.7 1.0
NE2 D:HIS117 4.0 25.9 1.0
CD2 D:HIS117 4.1 23.7 1.0
NE2 D:HIS46 4.2 20.3 1.0
CD2 D:HIS46 4.3 19.1 1.0
C D:HIS46 4.5 19.1 1.0
N D:ASN47 4.6 18.2 1.0
CA D:CYS112 4.6 18.8 1.0
CG D:PHE114 4.7 21.2 1.0
CG D:MET121 4.8 19.7 1.0
CA D:HIS117 4.9 23.4 1.0
N D:PHE114 4.9 19.0 1.0
CA D:GLY45 4.9 20.6 1.0
CB D:MET121 5.0 20.9 1.0

Reference:

K.K.Inampudi, W.Meng, P.H.Tobin, C.J.Wilson. Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48F/V95I) To Be Published.
Page generated: Mon Jul 14 03:51:36 2025

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