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Copper in PDB 3zja: The Crystal Structure of A Cu(I) Metallochaperone From Streptomyces Lividans

Protein crystallography data

The structure of The Crystal Structure of A Cu(I) Metallochaperone From Streptomyces Lividans, PDB code: 3zja was solved by K.L.I.M.Blundell, M.Hough, J.A.R.Worrall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.32 / 1.48
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.480, 47.840, 50.040, 90.00, 90.00, 90.00
R / Rfree (%) 18.544 / 22.675

Copper Binding Sites:

The binding sites of Copper atom in the The Crystal Structure of A Cu(I) Metallochaperone From Streptomyces Lividans (pdb code 3zja). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the The Crystal Structure of A Cu(I) Metallochaperone From Streptomyces Lividans, PDB code: 3zja:

Copper binding site 1 out of 1 in 3zja

Go back to Copper Binding Sites List in 3zja
Copper binding site 1 out of 1 in the The Crystal Structure of A Cu(I) Metallochaperone From Streptomyces Lividans


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of The Crystal Structure of A Cu(I) Metallochaperone From Streptomyces Lividans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu999

b:19.6
occ:1.00
NE2 A:HIS127 2.1 18.0 1.0
ND1 A:HIS98 2.2 18.3 1.0
SD A:MET105 2.3 21.3 1.0
SD A:MET129 2.3 24.1 1.0
CE1 A:HIS98 3.0 19.0 1.0
CD2 A:HIS127 3.1 15.9 1.0
CE1 A:HIS127 3.1 16.2 1.0
CE A:MET105 3.1 28.0 1.0
CG A:HIS98 3.2 17.1 1.0
CG A:MET105 3.4 17.5 1.0
CG A:MET129 3.4 20.9 1.0
CE A:MET129 3.5 28.3 1.0
CB A:HIS98 3.6 16.4 1.0
CB A:MET105 3.7 17.8 1.0
CB A:MET129 3.8 16.9 1.0
NE2 A:HIS98 4.1 18.9 1.0
ND1 A:HIS127 4.2 18.1 1.0
CG A:HIS127 4.2 15.4 1.0
CD2 A:HIS98 4.2 16.9 1.0
CA A:MET129 4.8 15.5 1.0

Reference:

K.L.I.M.Blundell, M.A.Hough, E.Vijgenboom, J.A.R.Worrall. Structural and Mechanistic Insights Into An Extracytoplasmic Copper Trafficking Pathway in Streptomyces Lividans. Biochem.J. V. 459 525 2014.
ISSN: ISSN 0264-6021
PubMed: 24548299
DOI: 10.1042/BJ20140017
Page generated: Mon Jul 14 03:19:35 2025

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