Atomistry » Copper » PDB 2vr7-2xv0 » 2wz0
Atomistry »
  Copper »
    PDB 2vr7-2xv0 »
      2wz0 »

Copper in PDB 2wz0: L38V SOD1 Mutant Complexed with Aniline.

Enzymatic activity of L38V SOD1 Mutant Complexed with Aniline.

All present enzymatic activity of L38V SOD1 Mutant Complexed with Aniline.:
1.15.1.1;

Protein crystallography data

The structure of L38V SOD1 Mutant Complexed with Aniline., PDB code: 2wz0 was solved by S.Antonyuk, R.W.Strange, S.S.Hasnain, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.00 / 1.72
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 39.006, 68.261, 50.988, 90.00, 106.15, 90.00
R / Rfree (%) 19.4 / 26

Other elements in 2wz0:

The structure of L38V SOD1 Mutant Complexed with Aniline. also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Copper Binding Sites:

The binding sites of Copper atom in the L38V SOD1 Mutant Complexed with Aniline. (pdb code 2wz0). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the L38V SOD1 Mutant Complexed with Aniline., PDB code: 2wz0:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 2wz0

Go back to Copper Binding Sites List in 2wz0
Copper binding site 1 out of 2 in the L38V SOD1 Mutant Complexed with Aniline.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of L38V SOD1 Mutant Complexed with Aniline. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu154

b:19.2
occ:0.80
ZN A:ZN154A 1.3 25.9 0.2
ND1 A:HIS46 2.0 15.3 1.0
NE2 A:HIS48 2.0 12.6 1.0
NE2 A:HIS120 2.1 15.5 1.0
CD2 A:HIS48 3.0 11.6 1.0
CD2 A:HIS120 3.0 15.7 1.0
CG A:HIS46 3.0 15.7 1.0
CE1 A:HIS46 3.0 17.4 1.0
CE1 A:HIS48 3.1 14.4 1.0
CE1 A:HIS120 3.1 15.3 1.0
CB A:HIS46 3.2 13.8 1.0
NE2 A:HIS63 3.4 17.9 1.0
CD2 A:HIS63 3.8 18.9 1.0
O A:HOH2124 3.8 26.9 1.0
CB A:VAL118 4.0 12.3 1.0
CD2 A:HIS46 4.1 18.8 1.0
CG A:HIS48 4.1 11.0 1.0
CG A:HIS120 4.1 13.7 1.0
NE2 A:HIS46 4.1 18.7 1.0
ND1 A:HIS48 4.1 10.9 1.0
ND1 A:HIS120 4.2 15.2 1.0
CG1 A:VAL118 4.2 13.1 1.0
CA A:HIS46 4.2 12.7 1.0
N A:HIS46 4.2 10.6 1.0
CE1 A:HIS63 4.3 19.1 1.0
O A:HOH2139 4.3 28.7 1.0
O A:VAL118 4.5 13.6 1.0
O A:HIS46 4.5 11.5 1.0
C A:HIS46 4.6 11.9 1.0
CG2 A:VAL118 4.6 12.1 1.0
CG A:HIS63 4.7 17.3 1.0
C A:VAL118 4.9 13.6 1.0
ND1 A:HIS63 5.0 17.2 1.0

Copper binding site 2 out of 2 in 2wz0

Go back to Copper Binding Sites List in 2wz0
Copper binding site 2 out of 2 in the L38V SOD1 Mutant Complexed with Aniline.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of L38V SOD1 Mutant Complexed with Aniline. within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Cu154

b:22.8
occ:1.00
NE2 F:HIS48 2.0 11.6 1.0
NE2 F:HIS120 2.0 14.8 1.0
ND1 F:HIS46 2.1 16.9 1.0
CD2 F:HIS120 2.9 15.1 1.0
CE1 F:HIS48 3.0 11.4 1.0
CD2 F:HIS48 3.0 12.8 1.0
CG F:HIS46 3.1 16.8 1.0
CE1 F:HIS120 3.1 18.2 1.0
CE1 F:HIS46 3.1 15.0 1.0
CB F:HIS46 3.3 13.8 1.0
NE2 F:HIS63 3.4 15.7 1.0
CD2 F:HIS63 3.7 16.8 1.0
O F:HOH2148 3.7 27.8 1.0
O F:HOH2072 4.0 29.0 1.0
CB F:VAL118 4.0 13.0 1.0
CG F:HIS120 4.1 14.9 1.0
ND1 F:HIS48 4.1 10.1 1.0
CG F:HIS48 4.1 9.6 1.0
ND1 F:HIS120 4.1 14.5 1.0
CG1 F:VAL118 4.2 11.8 1.0
NE2 F:HIS46 4.2 17.0 1.0
CD2 F:HIS46 4.2 16.7 1.0
CE1 F:HIS63 4.2 18.5 1.0
N F:HIS46 4.3 12.0 1.0
CA F:HIS46 4.3 12.4 1.0
O F:VAL118 4.5 11.9 1.0
O F:HIS46 4.6 11.3 1.0
CG F:HIS63 4.7 16.2 1.0
C F:HIS46 4.7 12.0 1.0
CG2 F:VAL118 4.8 10.2 1.0
ND1 F:HIS63 4.9 18.1 1.0
C F:VAL118 5.0 12.6 1.0

Reference:

S.Antonyuk, R.W.Strange, S.S.Hasnain. Structural Discovery of Small Molecule Binding Sites in Cu-Zn Human Superoxide Dismutase Familial Amyotrophic Lateral Sclerosis Mutants Provides Insights For Lead Optimization. J.Med.Chem. V. 53 1402 2010.
ISSN: ISSN 0022-2623
PubMed: 20067275
DOI: 10.1021/JM9017948
Page generated: Mon Jul 14 01:29:46 2025

Last articles

Mn in 3OBA
Mn in 3OB8
Mn in 3O3H
Mn in 3OCH
Mn in 3NIO
Mn in 3NWK
Mn in 3O1R
Mn in 3NVT
Mn in 3O1P
Mn in 3O1O
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy