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Copper in PDB 9bwi: Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol

Protein crystallography data

The structure of Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol, PDB code: 9bwi was solved by M.A.B.Morais, C.A.Santos, E.A.Araujo, C.R.Santos, L.G.Morao, M.L.Motta, M.T.Murakami, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.76 / 2.30
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 69.591, 69.591, 137.27, 90, 90, 120
R / Rfree (%) 26.7 / 29.1

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol (pdb code 9bwi). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol, PDB code: 9bwi:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 9bwi

Go back to Copper Binding Sites List in 9bwi
Copper binding site 1 out of 2 in the Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu202

b:78.3
occ:1.00
NE2 A:HIS46 2.1 72.3 1.0
NE2 A:HIS84 2.2 66.6 1.0
C3 A:GOL201 2.4 77.0 1.0
OE1 A:GLN50 2.5 85.5 1.0
C2 A:GOL201 2.5 78.5 1.0
C1 A:GOL201 2.8 74.4 1.0
O3 A:GOL201 2.9 81.4 1.0
CD2 A:HIS46 3.0 78.4 1.0
CE1 A:HIS84 3.1 67.5 1.0
CE1 A:HIS46 3.2 70.2 1.0
CD2 A:HIS84 3.2 63.2 1.0
O1 A:GOL201 3.5 76.5 1.0
CD A:GLN50 3.7 78.1 1.0
O2 A:GOL201 3.9 81.7 1.0
CG A:HIS46 4.2 79.3 1.0
NE2 A:GLN50 4.2 77.6 1.0
ND1 A:HIS46 4.2 72.2 1.0
ND1 A:HIS84 4.2 63.1 1.0
CG A:HIS84 4.3 61.2 1.0
NH1 A:ARG102 4.5 73.2 1.0
CE1 A:PHE98 4.5 64.2 1.0
CG A:GLN50 4.9 63.9 1.0

Copper binding site 2 out of 2 in 9bwi

Go back to Copper Binding Sites List in 9bwi
Copper binding site 2 out of 2 in the Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of Cellulose Oxidative Enzyme in Acidic pH with Glycerol within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu202

b:76.8
occ:1.00
NE2 B:HIS84 2.2 63.5 1.0
NE2 B:HIS46 2.3 74.7 1.0
C1 B:GOL201 2.4 81.5 1.0
OE1 B:GLN50 2.4 76.3 1.0
O2 B:GOL201 2.9 74.2 1.0
C2 B:GOL201 3.0 79.0 1.0
CD2 B:HIS84 3.1 64.0 1.0
O1 B:GOL201 3.1 78.4 1.0
CE1 B:HIS84 3.1 67.9 1.0
CD2 B:HIS46 3.2 78.1 1.0
CE1 B:HIS46 3.3 77.7 1.0
C3 B:GOL201 3.4 75.4 1.0
CD B:GLN50 3.5 72.7 1.0
NE2 B:GLN50 4.1 71.0 1.0
ND1 B:HIS84 4.3 66.5 1.0
CG B:HIS84 4.3 65.3 1.0
CG B:HIS46 4.4 76.8 1.0
ND1 B:HIS46 4.4 76.5 1.0
CE1 B:PHE98 4.4 68.4 1.0
NH1 B:ARG102 4.4 75.3 1.0
O3 B:GOL201 4.6 78.9 1.0
CG B:GLN50 4.7 72.4 1.0
CZ B:PHE98 4.9 70.3 1.0
CB B:GLN50 5.0 67.1 1.0

Reference:

M.A.B.Morais, C.A.Santos, E.A.Araujo, C.R.Santos, L.G.Morao, M.L.Motta, M.T.Murakami. Crystal Structure of Cellulose Oxidative Enzyme in Acid pH with Glycerol To Be Published.
Page generated: Sun Dec 15 10:20:05 2024

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