Copper in PDB 8vv5: The Crystal Structure of Brucella Abortus Ftra

The structure of The Crystal Structure of Brucella Abortus Ftra, PDB code: 8vv5 was solved by S.Roy, B.L.Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.62 / 1.84
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	142.759, 58.161, 100.907, 90, 130.06, 90
R / Rfree (%)	19.1 / 22.6

The binding sites of Copper atom in the The Crystal Structure of Brucella Abortus Ftra (pdb code 8vv5). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 4 binding sites of Copper where determined in the The Crystal Structure of Brucella Abortus Ftra, PDB code: 8vv5:
Jump to Copper binding site number: 1; 2; 3; 4;

Copper binding site 1 out of 4 in the The Crystal Structure of Brucella Abortus Ftra


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of The Crystal Structure of Brucella Abortus Ftra within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu201 b:29.8 occ:0.39 NE2 A:HIS118 1.9 29.2 1.0 NE2 A:HIS65 2.2 31.0 1.0 NE2 B:HIS151 2.4 32.4 1.0 CE1 A:HIS118 2.8 36.5 1.0 SD A:MET111 2.8 35.0 1.0 OE2 A:GLU67 2.8 38.8 1.0 CE1 B:HIS151 2.9 32.0 1.0 CD2 A:HIS65 2.9 36.0 1.0 CD2 A:HIS118 3.0 32.4 1.0 CE1 A:HIS65 3.3 35.3 1.0 CD A:GLU67 3.5 40.0 1.0 CD2 B:HIS151 3.6 31.6 1.0 CG A:GLU67 3.6 35.9 1.0 CG A:MET111 3.7 26.9 1.0 CE A:MET111 3.9 34.6 1.0 ND1 A:HIS118 3.9 33.8 1.0 CG A:HIS118 4.0 30.6 1.0 CG A:HIS65 4.1 29.9 1.0 ND1 B:HIS151 4.2 29.5 1.0 CD1 A:ILE48 4.2 36.2 1.0 ND1 A:HIS65 4.2 27.9 1.0 CG1 A:ILE48 4.3 42.2 1.0 O A:HOH303 4.4 43.3 1.0 CG B:HIS151 4.5 31.0 1.0 OE1 A:GLU67 4.6 37.8 1.0 CA A:GLY120 4.8 24.4 1.0

Copper binding site 2 out of 4 in the The Crystal Structure of Brucella Abortus Ftra


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of The Crystal Structure of Brucella Abortus Ftra within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu201 b:34.7 occ:0.39 NE2 B:HIS118 1.3 26.9 0.4 CE1 B:HIS118 2.3 28.1 0.4 CD2 B:HIS118 2.4 25.7 0.4 NE2 B:HIS65 2.5 23.9 1.0 NE2 A:HIS151 2.7 21.8 1.0 OE2 B:GLU67 2.7 34.4 1.0 CE1 A:HIS151 3.1 23.7 1.0 SD B:MET111 3.3 28.2 1.0 CD2 B:HIS65 3.3 26.6 1.0 ND1 B:HIS118 3.4 26.0 0.4 CD B:GLU67 3.5 29.8 1.0 CG B:HIS118 3.5 24.9 0.4 CG B:MET111 3.5 23.5 1.0 CG B:GLU67 3.6 30.3 1.0 CE1 B:HIS65 3.6 23.4 1.0 CD2 A:HIS151 3.9 26.7 1.0 CB B:HIS118 4.0 25.6 0.6 O B:HOH304 4.1 42.9 1.0 CD2 B:HIS118 4.3 26.9 0.6 CA B:GLY120 4.3 23.5 1.0 CG B:HIS118 4.4 28.6 0.6 ND1 A:HIS151 4.4 23.9 1.0 CE B:MET111 4.5 24.1 1.0 CG B:HIS65 4.5 22.2 1.0 OE1 B:GLU67 4.6 36.1 1.0 ND1 B:HIS65 4.6 22.0 1.0 N B:GLY120 4.7 19.4 1.0 CG A:HIS151 4.8 25.1 1.0 CB B:GLU67 4.9 29.1 1.0 CB B:HIS118 4.9 27.9 0.4

Copper binding site 3 out of 4 in the The Crystal Structure of Brucella Abortus Ftra


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of The Crystal Structure of Brucella Abortus Ftra within 5.0Å range: probe atom residue distance (Å) B Occ C:Cu201 b:29.5 occ:0.43 NE2 C:HIS118 1.8 34.7 1.0 NE2 D:HIS151 2.4 36.4 1.0 NE2 C:HIS65 2.4 36.3 1.0 CE1 D:HIS151 2.6 35.5 1.0 OE2 C:GLU67 2.6 46.4 1.0 CE1 C:HIS118 2.7 42.7 1.0 SD C:MET111 2.7 37.2 1.0 CD2 C:HIS118 3.0 33.2 1.0 CD2 C:HIS65 3.1 27.7 1.0 CE1 C:HIS65 3.5 35.1 1.0 CD C:GLU67 3.5 41.5 1.0 CG C:MET111 3.5 31.2 1.0 CG C:GLU67 3.7 42.1 1.0 CD2 D:HIS151 3.7 31.9 1.0 ND1 C:HIS118 3.9 39.8 1.0 ND1 D:HIS151 3.9 38.9 1.0 CG C:HIS118 4.0 31.1 1.0 CE C:MET111 4.3 35.0 1.0 CG C:HIS65 4.3 30.0 1.0 ND1 C:HIS65 4.4 32.8 1.0 CG D:HIS151 4.5 36.1 1.0 CD1 C:ILE48 4.6 45.6 1.0 OE1 C:GLU67 4.6 37.0 1.0 CA C:GLY120 4.8 25.5 1.0 CB C:MET111 4.9 26.3 1.0

Copper binding site 4 out of 4 in the The Crystal Structure of Brucella Abortus Ftra


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of The Crystal Structure of Brucella Abortus Ftra within 5.0Å range: probe atom residue distance (Å) B Occ D:Cu201 b:31.1 occ:0.29 NE2 D:HIS118 1.3 30.4 0.4 CE1 D:HIS118 2.2 28.0 0.4 CD2 D:HIS118 2.4 27.4 0.4 NE2 C:HIS151 2.5 30.1 1.0 NE2 D:HIS65 2.6 30.1 1.0 OE2 D:GLU67 2.9 37.0 1.0 CE1 C:HIS151 2.9 34.4 1.0 SD D:MET111 3.1 26.3 1.0 ND1 D:HIS118 3.3 28.3 0.4 CG D:MET111 3.4 24.8 1.0 CD2 D:HIS65 3.4 29.7 1.0 CG D:HIS118 3.5 27.2 0.4 CD D:GLU67 3.6 36.1 1.0 CE1 D:HIS65 3.6 27.9 1.0 CG D:GLU67 3.8 36.2 1.0 CD2 C:HIS151 3.8 30.9 1.0 CD1 D:ILE48 3.9 42.3 1.0 CB D:HIS118 4.0 28.1 0.6 ND1 C:HIS151 4.2 31.6 1.0 CE D:MET111 4.3 26.9 1.0 CD2 D:HIS118 4.4 28.5 0.6 CG D:HIS118 4.4 29.1 0.6 CG D:HIS65 4.6 25.9 1.0 OE1 D:GLU67 4.6 34.1 1.0 CG C:HIS151 4.7 36.2 1.0 ND1 D:HIS65 4.7 24.0 1.0 CA D:GLY120 4.7 23.6 1.0 CB D:MET111 4.9 18.4 1.0 CB D:HIS118 4.9 27.9 0.4 N D:GLY120 5.0 21.1 1.0

S.Roy, A.Kerkan, D.W.Martin, S.Banerjee, B.L.Garcia. Crystal Structures of Ftra and Ftrb of the Brucella Abortus Ferrous Iron Transporter Ftrabcd System To Be Published.