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Copper in PDB 8vqi: Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide

Enzymatic activity of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide

All present enzymatic activity of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide:
1.3.7.7;

Other elements in 8vqi:

The structure of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide also contains other interesting chemical elements:

Iron (Fe) 8 atoms
Magnesium (Mg) 2 atoms

Copper Binding Sites:

The binding sites of Copper atom in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide (pdb code 8vqi). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide, PDB code: 8vqi:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 8vqi

Go back to Copper Binding Sites List in 8vqi
Copper binding site 1 out of 2 in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu601

b:164.8
occ:1.00
O D:HOH601 2.6 94.5 1.0
CU B:CU602 2.9 167.4 1.0
CE B:MET408 3.2 111.1 1.0
CE D:MET408 3.3 101.2 1.0
SD D:MET408 3.6 109.9 1.0
SD B:MET408 3.7 121.8 1.0
NE2 B:HIS404 4.0 97.2 1.0
NE2 D:HIS404 4.1 88.8 1.0
CE1 B:HIS404 4.3 94.7 1.0
NH2 D:ARG360 4.3 93.1 1.0
CD2 D:HIS404 4.4 88.5 1.0
CG B:MET408 4.9 114.1 1.0

Copper binding site 2 out of 2 in 8vqi

Go back to Copper Binding Sites List in 8vqi
Copper binding site 2 out of 2 in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor with Pchlide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu602

b:167.4
occ:1.00
CE B:MET408 2.7 111.1 1.0
CU B:CU601 2.9 164.8 1.0
NE2 B:HIS404 3.0 97.2 1.0
SD D:MET408 3.3 109.9 1.0
NE2 D:HIS404 3.5 88.8 1.0
O B:HOH701 3.6 79.7 1.0
CD2 B:HIS404 3.8 98.4 1.0
SD B:MET408 4.0 121.8 1.0
CE1 B:HIS404 4.0 94.7 1.0
CE1 D:HIS404 4.2 86.3 1.0
CE D:MET408 4.3 101.2 1.0
CD2 D:HIS404 4.5 88.5 1.0
CG D:MET408 4.9 104.8 1.0
CG B:HIS404 5.0 97.0 1.0

Reference:

R.Kashyap, E.Antony. Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor To Be Published.
Page generated: Mon Jul 14 09:38:08 2025

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