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Copper in PDB 8vqh: Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor

Enzymatic activity of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor

All present enzymatic activity of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor:
1.3.7.7;

Other elements in 8vqh:

The structure of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor also contains other interesting chemical elements:

Iron (Fe) 8 atoms

Copper Binding Sites:

The binding sites of Copper atom in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor (pdb code 8vqh). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor, PDB code: 8vqh:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 8vqh

Go back to Copper Binding Sites List in 8vqh
Copper binding site 1 out of 2 in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu601

b:100.3
occ:1.00
CU D:CU602 2.7 110.3 1.0
O D:HOH701 3.0 29.6 1.0
SD D:MET408 3.3 36.4 0.5
NE2 D:HIS404 3.4 29.1 1.0
CE D:MET408 3.4 38.4 0.5
SD B:MET408 3.6 48.1 0.5
CD2 D:HIS404 3.9 28.4 1.0
NE2 B:HIS404 4.0 31.1 1.0
SD B:MET408 4.0 47.5 0.5
CE1 B:HIS404 4.1 32.0 1.0
CE B:MET408 4.5 41.9 0.5
CE1 D:HIS404 4.6 28.6 1.0
NZ D:LYS364 4.6 42.5 1.0
CG B:MET408 4.9 44.8 0.5
CG B:MET408 4.9 44.8 0.5

Copper binding site 2 out of 2 in 8vqh

Go back to Copper Binding Sites List in 8vqh
Copper binding site 2 out of 2 in the Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu602

b:110.3
occ:1.00
O B:HOH601 2.5 38.1 1.0
CU D:CU601 2.7 100.3 1.0
SD D:MET408 2.8 36.4 0.5
NE2 D:HIS404 3.0 29.1 1.0
CE1 B:HIS404 3.1 32.0 1.0
CE1 D:HIS404 3.5 28.6 1.0
CE B:MET408 3.7 41.9 0.5
NE2 B:HIS404 3.8 31.1 1.0
SD B:MET408 3.9 48.1 0.5
ND1 B:HIS404 4.2 34.2 1.0
CG D:MET408 4.2 41.7 0.5
CE D:MET408 4.2 38.4 0.5
CD2 D:HIS404 4.2 28.4 1.0
CG D:MET408 4.3 42.2 0.5
CE D:MET408 4.8 38.9 0.5
ND1 D:HIS404 4.8 27.0 1.0

Reference:

R.Kashyap, E.Antony. Cryoem Structure of Bchn-Bchb Electron Acceptor Component Protein of Dpor To Be Published.
Page generated: Mon Jul 14 09:38:02 2025

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