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Copper in PDB 8eqo: Crystal Structure of E.Coli Dsba Mutant K58A

Protein crystallography data

The structure of Crystal Structure of E.Coli Dsba Mutant K58A, PDB code: 8eqo was solved by G.Wang, B.Heras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.18 / 1.62
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 117.635, 63.09, 74.408, 90, 126.65, 90
R / Rfree (%) 15.5 / 18.4

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of E.Coli Dsba Mutant K58A (pdb code 8eqo). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Crystal Structure of E.Coli Dsba Mutant K58A, PDB code: 8eqo:

Copper binding site 1 out of 1 in 8eqo

Go back to Copper Binding Sites List in 8eqo
Copper binding site 1 out of 1 in the Crystal Structure of E.Coli Dsba Mutant K58A


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of E.Coli Dsba Mutant K58A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu202

b:31.5
occ:1.00
OE2 B:GLU4 2.0 32.4 1.0
N B:ALA1 2.1 31.2 1.0
O B:ALA1 2.1 26.2 1.0
O B:HOH477 2.7 39.4 1.0
C B:ALA1 2.7 27.4 1.0
CA B:ALA1 2.8 29.5 1.0
CD B:GLU4 2.9 35.6 1.0
CG B:GLU4 3.3 31.5 1.0
CB B:ALA1 3.7 32.2 1.0
O B:HOH367 3.9 26.8 1.0
N B:GLN2 4.0 24.0 1.0
OE1 B:GLU4 4.0 34.5 1.0
O B:HOH368 4.3 22.5 1.0
CA B:GLN2 4.7 24.1 1.0
CB B:GLU4 4.8 31.0 1.0
C B:GLN2 4.9 26.9 1.0
O B:GLN2 5.0 23.9 1.0

Reference:

G.Wang, J.Qin, A.D.Verderosa, L.Hor, C.Santos-Martin, J.J.Paxman, J.L.Martin, M.Totsika, B.Heras. A Buried Water Network Modulates the Activity of the Escherichia Coli Disulphide Catalyst Dsba Antioxidants V. 12 2023.
ISSN: ESSN 2076-3921
DOI: 10.3390/ANTIOX12020380
Page generated: Wed Jul 31 09:40:26 2024

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