Copper in PDB 8dg1: Crystal Structure of Ecdsba in A Complex with Dmso

The structure of Crystal Structure of Ecdsba in A Complex with Dmso, PDB code: 8dg1 was solved by R.L.Whitehouse, O.V.Ilyichova, A.J.Taylor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.86 / 1.95
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	117.214, 63.205, 74.848, 90, 125.25, 90
R / Rfree (%)	19 / 22.1

The binding sites of Copper atom in the Crystal Structure of Ecdsba in A Complex with Dmso (pdb code 8dg1). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Crystal Structure of Ecdsba in A Complex with Dmso, PDB code: 8dg1:

Copper binding site 1 out of 1 in the Crystal Structure of Ecdsba in A Complex with Dmso


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Ecdsba in A Complex with Dmso within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu201 b:68.4 occ:1.00 O B:ALA1 2.1 57.1 1.0 N B:ALA1 2.3 51.2 1.0 OE2 B:GLU4 2.3 52.1 1.0 C B:ALA1 2.8 50.9 1.0 CA B:ALA1 3.0 51.3 1.0 CD B:GLU4 3.2 61.8 1.0 CG B:GLU4 3.3 48.9 1.0 CB B:ALA1 3.7 53.4 1.0 O B:HOH321 4.0 46.4 1.0 N B:GLN2 4.1 49.1 1.0 O B:HOH325 4.2 45.4 1.0 OE1 B:GLU4 4.4 62.6 1.0 CA B:GLN2 4.8 43.6 1.0 C B:GLN2 4.8 42.7 1.0 O B:GLN2 4.8 42.5 1.0 CB B:GLU4 4.9 48.0 1.0 C1 B:DMS207 4.9 67.5 1.0

R.L.Whitehouse, W.S.Alwan, O.V.Ilyichova, A.J.Taylor, I.R.Chandrashekaran, B.Mohanty, B.C.Doak, M.J.Scanlon. Fragment Screening Libraries For the Identification of Protein Hot Spots and Their Minimal Binding Pharmacophores Rsc Med Chem 2022.
ISSN: ESSN 2632-8682
DOI: 10.1039/D2MD00253A