Copper in PDB 8bwv: Crystal Structure of Silf Cu(I)

The structure of Crystal Structure of Silf Cu(I), PDB code: 8bwv was solved by R.M.Lithgo, S.B.Carr, D.J.Scott, A.Quigley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.28 / 2.20
Space group	I 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	77.297, 77.297, 187.69, 90, 90, 90
R / Rfree (%)	28 / 29.9

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Copper atom in the Crystal Structure of Silf Cu(I) (pdb code 8bwv). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 12 binding sites of Copper where determined in the Crystal Structure of Silf Cu(I), PDB code: 8bwv:
Jump to Copper binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Copper binding site 1 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu101 b:37.7 occ:1.00 NE2 A:HIS36 2.1 29.1 1.0 SD A:MET47 2.3 49.0 1.0 SD A:MET49 2.4 41.0 1.0 CD2 A:HIS36 3.0 30.7 1.0 CE1 A:HIS36 3.2 32.7 1.0 CE A:MET49 3.2 42.7 1.0 CG A:MET47 3.3 45.8 1.0 CG A:MET49 3.3 41.0 1.0 CE A:MET47 3.4 46.9 1.0 CB A:MET49 4.0 43.3 1.0 CG A:HIS36 4.2 30.2 1.0 ND1 A:HIS36 4.2 33.3 1.0 CB A:MET47 4.7 40.1 1.0 O A:MET47 4.8 35.1 1.0

Copper binding site 2 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu102 b:60.8 occ:1.00 NE2 A:HIS71 2.1 42.2 1.0 OE2 A:GLU37 2.4 83.0 1.0 CE1 A:HIS71 2.9 46.8 1.0 CD A:GLU37 3.0 55.2 1.0 OE1 A:GLU37 3.2 52.8 1.0 CD2 A:HIS71 3.3 45.8 1.0 ND1 A:HIS71 4.1 42.8 1.0 CG A:GLU37 4.2 47.4 1.0 CG A:HIS71 4.3 45.9 1.0 CG2 A:VAL21 4.9 38.7 1.0

Copper binding site 3 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu101 b:38.9 occ:1.00 SD B:MET47 2.0 43.3 1.0 NE2 B:HIS36 2.3 46.3 1.0 SD B:MET49 2.3 44.1 1.0 O C:HOH201 2.3 35.7 1.0 CD2 B:HIS36 3.1 43.5 1.0 CG B:MET49 3.1 43.4 1.0 CE B:MET47 3.1 55.1 1.0 CG B:MET47 3.2 40.1 1.0 CE1 B:HIS36 3.3 43.1 1.0 CB B:MET49 3.8 42.8 1.0 CE B:MET49 3.9 63.5 1.0 CG B:HIS36 4.3 43.1 1.0 ND1 B:HIS36 4.4 36.2 1.0 N C:MET11 4.4 77.4 1.0 CB B:MET47 4.5 38.1 1.0 O B:MET47 4.7 35.9 1.0 C B:MET47 4.9 42.1 1.0 N B:MET49 4.9 42.5 1.0 CA B:MET49 5.0 43.8 1.0

Copper binding site 4 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu102 b:59.2 occ:1.00 NE2 B:HIS71 2.1 51.1 1.0 OE2 B:GLU37 2.3 86.1 1.0 CE1 B:HIS71 2.9 45.0 1.0 CD B:GLU37 3.0 57.8 1.0 OE1 B:GLU37 3.2 51.2 1.0 CD2 B:HIS71 3.3 40.4 1.0 ND1 B:HIS71 4.1 44.8 1.0 CG B:GLU37 4.1 50.0 1.0 CG B:HIS71 4.3 43.5 1.0 CG2 B:VAL21 4.9 38.6 1.0

Copper binding site 5 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 5 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ C:Cu101 b:37.8 occ:1.00 NE2 C:HIS36 2.1 30.2 1.0 SD C:MET47 2.2 48.8 1.0 SD C:MET49 2.4 45.2 1.0 O B:HOH201 2.5 34.6 1.0 CD2 C:HIS36 3.0 31.6 1.0 CE1 C:HIS36 3.2 33.1 1.0 CE C:MET49 3.2 45.0 1.0 CG C:MET47 3.3 45.7 1.0 CG C:MET49 3.3 41.2 1.0 CE C:MET47 3.4 45.4 1.0 CB C:MET49 4.0 42.6 1.0 CG C:HIS36 4.2 30.0 1.0 ND1 C:HIS36 4.2 34.4 1.0 N B:MET11 4.5 80.7 1.0 CB C:MET47 4.7 40.4 1.0 O C:MET47 4.8 37.4 1.0

Copper binding site 6 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 6 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ C:Cu102 b:59.3 occ:1.00 NE2 C:HIS71 2.1 42.1 1.0 OE2 C:GLU37 2.4 87.1 1.0 CE1 C:HIS71 2.9 46.5 1.0 CD C:GLU37 3.1 54.6 1.0 OE1 C:GLU37 3.3 56.7 1.0 CD2 C:HIS71 3.3 47.1 1.0 ND1 C:HIS71 4.1 45.0 1.0 CG C:GLU37 4.3 48.2 1.0 CG C:HIS71 4.3 47.2 1.0 CG2 C:VAL21 4.9 40.7 1.0

Copper binding site 7 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 7 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ D:Cu101 b:39.5 occ:1.00 SD D:MET47 2.0 43.5 1.0 NE2 D:HIS36 2.2 42.6 1.0 SD D:MET49 2.3 40.5 1.0 CD2 D:HIS36 3.0 40.6 1.0 CG D:MET49 3.1 40.9 1.0 CG D:MET47 3.2 40.3 1.0 CE D:MET47 3.2 56.9 1.0 CE1 D:HIS36 3.3 42.6 1.0 CE D:MET49 3.4 38.0 1.0 CB D:MET49 3.8 41.8 1.0 CG D:HIS36 4.3 41.3 1.0 ND1 D:HIS36 4.3 35.2 1.0 CB D:MET47 4.5 37.5 1.0 O D:MET47 4.7 34.7 1.0 C D:MET47 4.9 41.2 1.0 N D:MET49 4.9 41.6 1.0 CA D:MET49 5.0 42.6 1.0

Copper binding site 8 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 8 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ D:Cu102 b:57.4 occ:1.00 NE2 D:HIS71 2.1 50.0 1.0 OE2 D:GLU37 2.3 84.5 1.0 CE1 D:HIS71 2.8 45.8 1.0 CD D:GLU37 3.0 56.6 1.0 CD2 D:HIS71 3.2 39.9 1.0 OE1 D:GLU37 3.2 55.6 1.0 ND1 D:HIS71 4.0 44.9 1.0 CG D:GLU37 4.1 48.1 1.0 CG D:HIS71 4.2 43.4 1.0 CG2 D:VAL21 4.8 40.9 1.0

Copper binding site 9 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 9 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ E:Cu101 b:29.2 occ:1.00 SD E:MET47 2.1 31.2 1.0 NE2 E:HIS36 2.2 23.4 1.0 O F:HOH202 2.3 27.3 1.0 SD E:MET49 2.3 32.4 1.0 CD2 E:HIS36 3.0 22.3 1.0 CG E:MET49 3.2 32.3 1.0 CE1 E:HIS36 3.2 22.9 1.0 CG E:MET47 3.2 25.7 1.0 CE E:MET49 3.3 30.9 1.0 CE E:MET47 3.3 38.0 1.0 CB E:MET49 3.9 32.0 1.0 CG E:HIS36 4.2 23.4 1.0 ND1 E:HIS36 4.3 21.8 1.0 N F:MET11 4.5 67.0 1.0 CB E:MET47 4.6 27.5 1.0 O E:MET47 4.7 23.8 1.0 C E:MET47 4.9 25.9 1.0

Copper binding site 10 out of 12 in the Crystal Structure of Silf Cu(I)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 10 of Crystal Structure of Silf Cu(I) within 5.0Å range: probe atom residue distance (Å) B Occ E:Cu102 b:46.8 occ:1.00 NE2 E:HIS71 2.0 35.2 1.0 OE2 E:GLU37 2.3 86.6 1.0 CE1 E:HIS71 2.8 31.7 1.0 CD E:GLU37 3.0 43.6 1.0 CD2 E:HIS71 3.2 30.6 1.0 OE1 E:GLU37 3.2 50.0 1.0 ND1 E:HIS71 4.0 31.1 1.0 CG E:GLU37 4.2 37.3 1.0 CG E:HIS71 4.2 31.9 1.0 CG2 E:VAL21 4.7 36.6 1.0

R.M.Lithgo, R.M.Lithgo, S.B.Carr, D.J.Scott, A.Quigley. N/A N/A.