Copper in PDB 7wwt: Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris)

All present enzymatic activity of Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris):
1.15.1.1;

The structure of Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris), PDB code: 7wwt was solved by S.Narikiyo, Y.Furukawa, M.Akutsu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.92 / 1.60
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	50.862, 50.862, 283.405, 90, 90, 90
R / Rfree (%)	23.8 / 27.5

The structure of Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris) also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Copper atom in the Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris) (pdb code 7wwt). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris), PDB code: 7wwt:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu202 b:23.1 occ:1.00 NE2 A:HIS48 1.9 20.4 1.0 ND1 A:HIS46 2.0 20.3 1.0 NE2 A:HIS120 2.1 18.6 1.0 CE1 A:HIS48 2.9 19.2 1.0 CD2 A:HIS120 2.9 21.1 1.0 CG A:HIS46 3.0 21.8 1.0 CD2 A:HIS48 3.0 19.4 1.0 CE1 A:HIS46 3.0 21.9 1.0 NE2 A:HIS63 3.1 19.6 1.0 CE1 A:HIS120 3.2 23.0 1.0 CB A:HIS46 3.2 24.6 1.0 O A:HOH414 3.5 54.3 1.0 O A:HOH392 3.5 28.3 1.0 CD2 A:HIS63 3.5 20.4 1.0 CB A:VAL118 3.9 21.8 1.0 CG1 A:VAL118 4.0 24.9 1.0 ND1 A:HIS48 4.0 20.1 1.0 CG A:HIS48 4.1 20.0 1.0 CG A:HIS120 4.1 19.7 1.0 CE1 A:HIS63 4.1 18.5 1.0 CD2 A:HIS46 4.1 19.6 1.0 ND1 A:HIS120 4.2 20.2 1.0 NE2 A:HIS46 4.2 21.7 1.0 CA A:HIS46 4.2 19.7 1.0 N A:HIS46 4.3 19.9 1.0 O A:VAL118 4.5 23.0 1.0 O A:HIS46 4.6 19.0 1.0 CG2 A:VAL118 4.6 19.7 1.0 CG A:HIS63 4.7 17.2 1.0 C A:HIS46 4.7 19.8 1.0 ND1 A:HIS63 4.9 17.2 1.0 C A:VAL118 5.0 19.6 1.0

Copper binding site 2 out of 2 in the Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cu/Zn-Superoxide Dismutase From Dog (Canis Familiaris) within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu202 b:36.9 occ:1.00 NE2 B:HIS120 2.0 37.1 1.0 NE2 B:HIS48 2.1 30.5 1.0 ND1 B:HIS46 2.2 29.2 1.0 CD2 B:HIS120 2.7 35.0 1.0 CG B:HIS46 3.0 28.4 1.0 CD2 B:HIS48 3.0 34.2 1.0 CE1 B:HIS48 3.1 36.6 1.0 CE1 B:HIS120 3.2 35.5 1.0 CE1 B:HIS46 3.2 29.3 1.0 CB B:HIS46 3.2 28.6 1.0 O B:HOH305 3.5 36.0 1.0 NE2 B:HIS63 3.6 32.2 1.0 CD2 B:HIS63 3.8 34.4 1.0 CG B:HIS120 4.0 37.1 1.0 CB B:VAL118 4.1 29.4 1.0 ND1 B:HIS120 4.1 36.7 1.0 N B:HIS46 4.1 24.8 1.0 ND1 B:HIS48 4.2 29.6 1.0 CG B:HIS48 4.2 31.4 1.0 CA B:HIS46 4.2 27.9 1.0 CD2 B:HIS46 4.2 31.3 1.0 NE2 B:HIS46 4.3 28.1 1.0 CG1 B:VAL118 4.4 27.0 1.0 O B:HIS46 4.4 23.4 1.0 O B:VAL118 4.5 27.4 1.0 CE1 B:HIS63 4.6 35.5 1.0 C B:HIS46 4.6 24.5 1.0 CG B:HIS63 4.8 36.2 1.0 O B:HOH385 4.8 35.2 1.0 CG2 B:VAL118 4.8 29.2 1.0 C B:VAL118 4.9 24.6 1.0

S.Narikiyo, Y.Furukawa, M.Akutsu. Crystal Structure of Dog Superoxide Dismutase To Be Published.