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Copper in PDB 7u2f: G116F Pseudomonas Aeruginosa Azurin

Protein crystallography data

The structure of G116F Pseudomonas Aeruginosa Azurin, PDB code: 7u2f was solved by Y.Liu, Y.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.58 / 2.20
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 49.172, 49.172, 261.961, 90, 90, 120
R / Rfree (%) 22.1 / 25.6

Copper Binding Sites:

The binding sites of Copper atom in the G116F Pseudomonas Aeruginosa Azurin (pdb code 7u2f). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the G116F Pseudomonas Aeruginosa Azurin, PDB code: 7u2f:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 7u2f

Go back to Copper Binding Sites List in 7u2f
Copper binding site 1 out of 2 in the G116F Pseudomonas Aeruginosa Azurin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of G116F Pseudomonas Aeruginosa Azurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:74.2
occ:1.00
ND1 A:HIS46 2.0 74.4 1.0
ND1 A:HIS117 2.2 75.8 1.0
SG A:CYS112 2.3 70.6 1.0
O A:GLY45 2.5 73.2 1.0
CE1 A:HIS46 2.9 83.9 1.0
CG A:HIS46 3.0 72.9 1.0
CG A:HIS117 3.2 82.6 1.0
CE1 A:HIS117 3.2 78.6 1.0
CA A:HIS46 3.2 65.5 1.0
CB A:CYS112 3.3 72.5 1.0
SD A:MET121 3.4 80.3 1.0
CB A:HIS117 3.4 72.6 1.0
C A:GLY45 3.5 73.1 1.0
CB A:HIS46 3.5 66.8 1.0
CB A:PHE114 3.6 71.4 1.0
N A:HIS46 3.8 69.7 1.0
NE2 A:HIS46 4.0 83.5 1.0
CE A:MET121 4.1 78.3 1.0
CD2 A:HIS46 4.1 70.1 1.0
NE2 A:HIS117 4.3 83.7 1.0
CD2 A:HIS117 4.3 78.2 1.0
CG A:PHE114 4.4 74.0 1.0
C A:HIS46 4.5 65.0 1.0
N A:ASN47 4.6 62.0 1.0
N A:PHE114 4.7 69.0 1.0
CA A:CYS112 4.7 60.8 1.0
CA A:PHE114 4.8 71.0 1.0
CA A:GLY45 4.8 76.4 1.0
CA A:HIS117 4.9 80.3 1.0
CG A:MET121 5.0 76.7 1.0

Copper binding site 2 out of 2 in 7u2f

Go back to Copper Binding Sites List in 7u2f
Copper binding site 2 out of 2 in the G116F Pseudomonas Aeruginosa Azurin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of G116F Pseudomonas Aeruginosa Azurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu203

b:92.1
occ:1.00
O3 A:TRS202 2.0 66.3 1.0
NE2 A:HIS83 2.2 62.4 1.0
C3 A:TRS202 2.3 64.0 1.0
N A:TRS202 2.6 59.1 1.0
CD2 A:HIS83 3.0 63.2 1.0
C A:TRS202 3.0 75.5 1.0
CE1 A:HIS83 3.3 67.5 1.0
C2 A:TRS202 3.9 66.8 1.0
CG A:HIS83 4.2 60.1 1.0
C1 A:TRS202 4.2 71.2 1.0
ND1 A:HIS83 4.3 58.8 1.0
O2 A:TRS202 4.5 63.6 1.0

Reference:

Y.Liu, Y.Lu. Structural Basis For the Effects of Phenylalanine on Tuning Reduction Potentials of the Type 1 Copper in Azurin To Be Published.
Page generated: Wed Jul 31 09:17:09 2024

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