Copper in PDB 7r4v: Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1

The structure of Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1, PDB code: 7r4v was solved by S.Morera, A.Vigouroux, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.02 / 1.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	61.4, 65.89, 70.12, 90, 90, 90
R / Rfree (%)	17.2 / 19.2

The binding sites of Copper atom in the Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1 (pdb code 7r4v). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1, PDB code: 7r4v:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu200 b:11.8 occ:1.00 NE2 B:HIS41 2.0 8.5 1.0 NE2 B:HIS95 2.1 10.4 1.0 NE2 A:HIS131 2.1 10.0 1.0 SD B:MET88 2.3 12.4 1.0 CE1 B:HIS95 3.0 13.3 1.0 CE1 B:HIS41 3.0 9.1 1.0 CE1 A:HIS131 3.0 9.8 1.0 CD2 B:HIS41 3.1 8.9 1.0 CG B:MET88 3.1 13.5 1.0 CD2 B:HIS95 3.1 9.9 1.0 CD2 A:HIS131 3.2 10.9 1.0 CE B:MET88 3.4 13.3 1.0 OE2 B:GLU43 4.0 16.5 1.0 ND1 B:HIS41 4.1 10.6 1.0 CG B:HIS41 4.1 9.7 1.0 ND1 B:HIS95 4.2 14.2 1.0 CG B:HIS95 4.2 10.7 1.0 ND1 A:HIS131 4.2 10.3 1.0 CA B:GLY97 4.3 8.0 1.0 CG A:HIS131 4.3 10.4 1.0 CD1 B:ILE24 4.4 15.1 1.0 CG1 B:ILE24 4.4 14.0 1.0 CB B:MET88 4.5 12.3 1.0 CD B:GLU43 4.6 12.9 1.0 CG B:GLU43 4.7 14.2 1.0 N B:GLY97 4.7 8.0 1.0 C B:GLY97 4.9 9.0 1.0

Copper binding site 2 out of 2 in the Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Strep-Tag Ftra-P19 From Rubrivivax Gelatinosus in Complex with An Endogenous CU1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu200 b:11.1 occ:1.00 NE2 A:HIS41 2.0 8.4 1.0 NE2 A:HIS95 2.1 10.5 1.0 NE2 B:HIS131 2.1 9.2 1.0 SD A:MET88 2.3 10.0 1.0 CE1 A:HIS41 2.9 8.3 1.0 CE1 A:HIS95 3.0 13.5 1.0 CD2 A:HIS41 3.1 9.4 1.0 CE1 B:HIS131 3.1 9.3 1.0 CG A:MET88 3.2 9.5 1.0 CD2 A:HIS95 3.2 10.1 1.0 CD2 B:HIS131 3.2 9.5 1.0 CE A:MET88 3.5 9.9 1.0 OE2 A:GLU43 4.0 15.5 1.0 ND1 A:HIS41 4.1 9.9 1.0 CG A:HIS41 4.1 9.2 1.0 ND1 A:HIS95 4.2 13.8 1.0 ND1 B:HIS131 4.2 9.9 1.0 CG A:HIS95 4.2 10.3 1.0 CA A:GLY97 4.3 8.9 1.0 CG B:HIS131 4.3 9.3 1.0 CD1 A:ILE24 4.4 12.7 1.0 CG1 A:ILE24 4.4 13.2 1.0 CB A:MET88 4.5 9.2 1.0 CD A:GLU43 4.6 13.7 1.0 CG A:GLU43 4.7 13.9 1.0 N A:GLY97 4.7 8.2 1.0 C A:GLY97 4.8 10.2 1.0

A.S.Steunou, A.Vigouroux, M.Aumont-Nicaise, S.Plancqueel, A.Boussac, S.Ouchane, S.Morera. New Insights Into the Mechanism of Iron Transport Through the Bacterial Ftr System Present in Pathogens. Febs J. V. 289 6286 2022.
ISSN: ISSN 1742-464X
PubMed: 35527501
DOI: 10.1111/FEBS.16476