Copper in PDB 7qho: Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)

Enzymatic activity of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)

Other elements in 7qho:

Copper Binding Sites:

Copper binding site 1 out of 6 in 7qho

Copper Binding Sites List in 7qho

Copper binding site 1 out of 6 in the Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated) within 5.0Å range: probe atom residue distance (Å) B Occ D:Cu603 b:54.1 occ:1.00 ND1 D:HIS265 2.0 45.1 1.0 NE2 D:HIS315 2.0 44.3 1.0 NE2 D:HIS314 2.4 46.1 1.0 CE1 D:HIS315 2.7 44.3 1.0 HE1 D:HIS315 2.8 44.3 1.0 HB2 D:HIS265 2.9 45.1 1.0 CE1 D:HIS265 2.9 45.1 1.0 CG D:HIS265 2.9 45.1 1.0 HE1 D:HIS265 3.1 45.1 1.0 CD2 D:HIS315 3.2 44.3 1.0 CE1 D:HIS314 3.2 46.1 1.0 HE1 D:HIS314 3.3 46.1 1.0 CB D:HIS265 3.4 45.1 1.0 HD2 D:HIS315 3.5 44.3 1.0 CD2 D:HIS314 3.5 46.1 1.0 HA D:HIS265 3.6 45.1 1.0 HD2 D:HIS314 3.8 46.1 1.0 ND1 D:HIS315 3.9 44.3 1.0 NE2 D:HIS265 3.9 45.1 1.0 HG21 D:VAL268 3.9 45.0 1.0 CD2 D:HIS265 4.0 45.1 1.0 HG22 D:VAL268 4.0 45.0 1.0 CA D:HIS265 4.1 45.1 1.0 CG D:HIS315 4.1 44.3 1.0 HB3 D:HIS265 4.2 45.1 1.0 HG12 D:VAL311 4.2 48.7 1.0 CG2 D:VAL268 4.4 45.0 1.0 ND1 D:HIS314 4.4 46.1 1.0 ND D:HAS602 4.5 46.8 1.0 CG D:HIS314 4.6 46.1 1.0 HD1 D:HIS315 4.6 44.3 1.0 C4D D:HAS602 4.6 46.8 1.0 C1D D:HAS602 4.7 46.8 1.0 FE D:HAS602 4.7 46.8 1.0 HG23 D:VAL268 4.7 45.0 1.0 HD2 D:HIS265 4.8 45.1 1.0 C3D D:HAS602 4.8 46.8 1.0 C2D D:HAS602 4.8 46.8 1.0 HA D:TRP312 4.9 47.5 1.0 NA D:HAS602 5.0 46.8 1.0 CE2 D:TYR269 5.0 46.4 1.0

Copper binding site 2 out of 6 in 7qho

Copper Binding Sites List in 7qho

Copper binding site 2 out of 6 in the Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated) within 5.0Å range: probe atom residue distance (Å) B Occ E:Cu402 b:48.8 occ:1.00 ND1 E:HIS244 1.9 41.3 1.0 SD E:MET296 2.4 42.3 1.0 SG E:CYS285 2.5 42.9 1.0 SG E:CYS289 2.5 40.5 1.0 CU2 E:CUA403 2.5 57.0 1.0 CE1 E:HIS244 2.5 41.3 1.0 HE1 E:HIS244 2.5 41.3 1.0 CG E:HIS244 3.1 41.3 1.0 HB3 E:CYS289 3.2 40.5 1.0 HE1 E:MET296 3.3 42.3 1.0 CE E:MET296 3.4 42.3 1.0 HB3 E:HIS244 3.4 41.3 1.0 HB2 E:CYS285 3.4 42.9 1.0 CB E:CYS289 3.4 40.5 1.0 CB E:CYS285 3.5 42.9 1.0 HE2 E:MET296 3.5 42.3 1.0 HB3 E:CYS285 3.7 42.9 1.0 CB E:HIS244 3.8 41.3 1.0 NE2 E:HIS244 3.8 41.3 1.0 HB2 E:CYS289 3.8 40.5 1.0 HD1 E:TRP153 3.8 40.2 1.0 HA E:HIS244 3.8 41.3 1.0 CG E:MET296 4.0 42.3 1.0 CD2 E:HIS244 4.1 41.3 1.0 HB3 E:MET296 4.1 42.3 1.0 O E:GLU287 4.1 43.0 1.0 HE3 E:MET296 4.2 42.3 1.0 ND1 E:HIS293 4.3 40.5 1.0 HB2 E:MET296 4.3 42.3 1.0 HG2 E:MET296 4.3 42.3 1.0 CA E:HIS244 4.4 41.3 1.0 HA E:HIS293 4.4 40.5 1.0 CB E:MET296 4.4 42.3 1.0 H E:SER245 4.4 43.2 1.0 HE2 E:HIS244 4.5 41.3 1.0 HB2 E:HIS244 4.6 41.3 1.0 HG3 E:MET296 4.6 42.3 1.0 H E:CYS289 4.6 40.5 1.0 CD1 E:TRP153 4.7 40.2 1.0 HE1 E:HIS293 4.7 40.5 1.0 CA E:CYS289 4.8 40.5 1.0 CE1 E:HIS293 4.9 40.5 1.0 H E:GLU287 4.9 43.0 1.0 CA E:CYS285 4.9 42.9 1.0 N E:CYS289 5.0 40.5 1.0 HD2 E:HIS244 5.0 41.3 1.0 HB1 E:ALA150 5.0 41.9 1.0

Copper binding site 3 out of 6 in 7qho

Copper Binding Sites List in 7qho

Copper binding site 3 out of 6 in the Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated) within 5.0Å range: probe atom residue distance (Å) B Occ E:Cu403 b:57.0 occ:1.00 ND1 E:HIS293 1.9 40.5 1.0 SG E:CYS285 2.4 42.9 1.0 SG E:CYS289 2.4 40.5 1.0 O E:GLU287 2.4 43.0 1.0 CU1 E:CUA402 2.5 48.8 1.0 CE1 E:HIS293 2.5 40.5 1.0 HE1 E:HIS293 2.6 40.5 1.0 CG E:HIS293 3.0 40.5 1.0 H E:CYS289 3.1 40.5 1.0 HB3 E:CYS285 3.2 42.9 1.0 HA E:HIS293 3.3 40.5 1.0 CB E:CYS285 3.4 42.9 1.0 HB3 E:CYS289 3.5 40.5 1.0 HB2 E:HIS293 3.5 40.5 1.0 H E:GLU287 3.6 43.0 1.0 CB E:CYS289 3.6 40.5 1.0 C E:GLU287 3.6 43.0 1.0 NE2 E:HIS293 3.7 40.5 1.0 N E:CYS289 3.7 40.5 1.0 CB E:HIS293 3.7 40.5 1.0 CD2 E:HIS293 3.9 40.5 1.0 CA E:HIS293 3.9 40.5 1.0 HB2 E:CYS285 3.9 42.9 1.0 HA E:MET288 4.0 40.8 1.0 O E:HIS293 4.0 40.5 1.0 ND1 E:HIS244 4.1 41.3 1.0 CA E:CYS289 4.3 40.5 1.0 N E:GLU287 4.3 43.0 1.0 SD E:MET296 4.3 42.3 1.0 HE2 E:HIS293 4.4 40.5 1.0 HB2 E:CYS289 4.4 40.5 1.0 C E:HIS293 4.4 40.5 1.0 C E:MET288 4.5 40.8 1.0 HB3 E:MET296 4.5 42.3 1.0 N E:MET288 4.5 40.8 1.0 HE1 E:HIS244 4.5 41.3 1.0 CA E:MET288 4.5 40.8 1.0 C E:CYS285 4.5 42.9 1.0 CA E:GLU287 4.5 43.0 1.0 O E:CYS285 4.5 42.9 1.0 HD1 E:TRP153 4.6 40.2 1.0 CA E:CYS285 4.6 42.9 1.0 HB3 E:HIS293 4.6 40.5 1.0 HB3 E:GLU287 4.6 43.0 1.0 HA E:HIS244 4.6 41.3 1.0 CE1 E:HIS244 4.7 41.3 1.0 HD2 E:HIS293 4.8 40.5 1.0 H E:GLY290 4.8 40.5 1.0 HB2 E:MET296 4.9 42.3 1.0 HA E:CYS289 4.9 40.5 1.0 N E:ALA286 5.0 42.5 1.0

Copper binding site 4 out of 6 in 7qho

Copper Binding Sites List in 7qho

Copper binding site 4 out of 6 in the Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated) within 5.0Å range: probe atom residue distance (Å) B Occ Q:Cu603 b:54.1 occ:1.00 ND1 Q:HIS265 2.0 45.1 1.0 NE2 Q:HIS315 2.0 44.3 1.0 NE2 Q:HIS314 2.4 46.1 1.0 CE1 Q:HIS315 2.7 44.3 1.0 HE1 Q:HIS315 2.8 44.3 1.0 HB2 Q:HIS265 2.9 45.1 1.0 CE1 Q:HIS265 2.9 45.1 1.0 CG Q:HIS265 2.9 45.1 1.0 HE1 Q:HIS265 3.1 45.1 1.0 CD2 Q:HIS315 3.2 44.3 1.0 CE1 Q:HIS314 3.2 46.1 1.0 HE1 Q:HIS314 3.3 46.1 1.0 CB Q:HIS265 3.4 45.1 1.0 HD2 Q:HIS315 3.5 44.3 1.0 CD2 Q:HIS314 3.5 46.1 1.0 HA Q:HIS265 3.6 45.1 1.0 HD2 Q:HIS314 3.8 46.1 1.0 ND1 Q:HIS315 3.9 44.3 1.0 NE2 Q:HIS265 3.9 45.1 1.0 HG21 Q:VAL268 3.9 45.0 1.0 CD2 Q:HIS265 4.0 45.1 1.0 HG22 Q:VAL268 4.0 45.0 1.0 CA Q:HIS265 4.1 45.1 1.0 CG Q:HIS315 4.1 44.3 1.0 HB3 Q:HIS265 4.2 45.1 1.0 HG12 Q:VAL311 4.2 48.7 1.0 ND1 Q:HIS314 4.4 46.1 1.0 CG2 Q:VAL268 4.4 45.0 1.0 ND Q:HAS602 4.5 46.8 1.0 CG Q:HIS314 4.6 46.1 1.0 HD1 Q:HIS315 4.6 44.3 1.0 C4D Q:HAS602 4.6 46.8 1.0 C1D Q:HAS602 4.7 46.8 1.0 FE Q:HAS602 4.7 46.8 1.0 HG23 Q:VAL268 4.7 45.0 1.0 HD2 Q:HIS265 4.8 45.1 1.0 C3D Q:HAS602 4.8 46.8 1.0 C2D Q:HAS602 4.8 46.8 1.0 HA Q:TRP312 4.9 47.5 1.0 NA Q:HAS602 5.0 46.8 1.0 CE2 Q:TYR269 5.0 46.4 1.0

Copper binding site 5 out of 6 in 7qho

Copper Binding Sites List in 7qho

Copper binding site 5 out of 6 in the Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 5 of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated) within 5.0Å range: probe atom residue distance (Å) B Occ R:Cu402 b:48.8 occ:1.00 ND1 R:HIS244 1.9 41.3 1.0 SD R:MET296 2.4 42.3 1.0 SG R:CYS285 2.5 42.9 1.0 SG R:CYS289 2.5 40.5 1.0 CU2 R:CUA403 2.5 57.0 1.0 CE1 R:HIS244 2.5 41.3 1.0 HE1 R:HIS244 2.5 41.3 1.0 CG R:HIS244 3.1 41.3 1.0 HB3 R:CYS289 3.2 40.5 1.0 HE1 R:MET296 3.3 42.3 1.0 CE R:MET296 3.4 42.3 1.0 HB3 R:HIS244 3.4 41.3 1.0 HB2 R:CYS285 3.4 42.9 1.0 CB R:CYS289 3.4 40.5 1.0 CB R:CYS285 3.5 42.9 1.0 HE2 R:MET296 3.5 42.3 1.0 HB3 R:CYS285 3.7 42.9 1.0 CB R:HIS244 3.8 41.3 1.0 NE2 R:HIS244 3.8 41.3 1.0 HB2 R:CYS289 3.8 40.5 1.0 HD1 R:TRP153 3.8 40.2 1.0 HA R:HIS244 3.8 41.3 1.0 CG R:MET296 4.0 42.3 1.0 CD2 R:HIS244 4.1 41.3 1.0 HB3 R:MET296 4.1 42.3 1.0 O R:GLU287 4.1 43.0 1.0 HE3 R:MET296 4.2 42.3 1.0 ND1 R:HIS293 4.3 40.5 1.0 HB2 R:MET296 4.3 42.3 1.0 HG2 R:MET296 4.3 42.3 1.0 CA R:HIS244 4.4 41.3 1.0 HA R:HIS293 4.4 40.5 1.0 CB R:MET296 4.4 42.3 1.0 H R:SER245 4.4 43.2 1.0 HE2 R:HIS244 4.5 41.3 1.0 HB2 R:HIS244 4.6 41.3 1.0 HG3 R:MET296 4.6 42.3 1.0 H R:CYS289 4.6 40.5 1.0 CD1 R:TRP153 4.7 40.2 1.0 HE1 R:HIS293 4.7 40.5 1.0 CA R:CYS289 4.8 40.5 1.0 CE1 R:HIS293 4.9 40.5 1.0 H R:GLU287 4.9 43.0 1.0 CA R:CYS285 4.9 42.9 1.0 N R:CYS289 5.0 40.5 1.0 HD2 R:HIS244 5.0 41.3 1.0 HB1 R:ALA150 5.0 41.9 1.0

Copper binding site 6 out of 6 in 7qho

Copper Binding Sites List in 7qho

Copper binding site 6 out of 6 in the Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 6 of Cytochrome Bcc-AA3 Supercomplex (Respiratory Supercomplex III2/IV2) From Corynebacterium Glutamicum (As Isolated) within 5.0Å range: probe atom residue distance (Å) B Occ R:Cu403 b:57.0 occ:1.00 ND1 R:HIS293 1.9 40.5 1.0 SG R:CYS285 2.4 42.9 1.0 SG R:CYS289 2.4 40.5 1.0 O R:GLU287 2.4 43.0 1.0 CU1 R:CUA402 2.5 48.8 1.0 CE1 R:HIS293 2.5 40.5 1.0 HE1 R:HIS293 2.6 40.5 1.0 CG R:HIS293 3.0 40.5 1.0 H R:CYS289 3.1 40.5 1.0 HB3 R:CYS285 3.2 42.9 1.0 HA R:HIS293 3.3 40.5 1.0 CB R:CYS285 3.4 42.9 1.0 HB3 R:CYS289 3.5 40.5 1.0 HB2 R:HIS293 3.5 40.5 1.0 H R:GLU287 3.6 43.0 1.0 CB R:CYS289 3.6 40.5 1.0 C R:GLU287 3.6 43.0 1.0 NE2 R:HIS293 3.7 40.5 1.0 N R:CYS289 3.7 40.5 1.0 CB R:HIS293 3.7 40.5 1.0 CD2 R:HIS293 3.9 40.5 1.0 CA R:HIS293 3.9 40.5 1.0 HB2 R:CYS285 4.0 42.9 1.0 HA R:MET288 4.0 40.8 1.0 O R:HIS293 4.0 40.5 1.0 ND1 R:HIS244 4.1 41.3 1.0 CA R:CYS289 4.3 40.5 1.0 N R:GLU287 4.3 43.0 1.0 SD R:MET296 4.3 42.3 1.0 HE2 R:HIS293 4.4 40.5 1.0 HB2 R:CYS289 4.4 40.5 1.0 C R:HIS293 4.4 40.5 1.0 C R:MET288 4.5 40.8 1.0 HB3 R:MET296 4.5 42.3 1.0 N R:MET288 4.5 40.8 1.0 HE1 R:HIS244 4.5 41.3 1.0 CA R:MET288 4.5 40.8 1.0 C R:CYS285 4.5 42.9 1.0 CA R:GLU287 4.5 43.0 1.0 O R:CYS285 4.5 42.9 1.0 HD1 R:TRP153 4.6 40.2 1.0 CA R:CYS285 4.6 42.9 1.0 HB3 R:HIS293 4.6 40.5 1.0 HB3 R:GLU287 4.6 43.0 1.0 HA R:HIS244 4.6 41.3 1.0 CE1 R:HIS244 4.7 41.3 1.0 HD2 R:HIS293 4.8 40.5 1.0 H R:GLY290 4.8 40.5 1.0 HB2 R:MET296 4.9 42.3 1.0 HA R:CYS289 4.9 40.5 1.0 N R:ALA286 5.0 42.5 1.0

Reference: