Copper in PDB 7kf7: Cryo-Electron Microscopy Structure of the Heavy Metal Efflux Pump Cusa in A Heterogeneous 1 Open and 2 Closed Protomer Conformation

Copper Binding Sites:

The binding sites of Copper atom in the Cryo-Electron Microscopy Structure of the Heavy Metal Efflux Pump Cusa in A Heterogeneous 1 Open and 2 Closed Protomer Conformation (pdb code 7kf7). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Cryo-Electron Microscopy Structure of the Heavy Metal Efflux Pump Cusa in A Heterogeneous 1 Open and 2 Closed Protomer Conformation, PDB code: 7kf7:

Copper binding site 1 out of 1 in 7kf7

Go back to Copper Binding Sites List in 7kf7
Copper binding site 1 out of 1 in the Cryo-Electron Microscopy Structure of the Heavy Metal Efflux Pump Cusa in A Heterogeneous 1 Open and 2 Closed Protomer Conformation


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cryo-Electron Microscopy Structure of the Heavy Metal Efflux Pump Cusa in A Heterogeneous 1 Open and 2 Closed Protomer Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu1101

b:9.7
occ:1.00
SD B:MET672 2.2 7.6 1.0
SD B:MET623 2.3 7.6 1.0
SD B:MET573 2.5 7.6 1.0
OE2 B:GLU625 2.5 7.6 1.0
HE1 B:MET672 2.9 52.6 1.0
CE B:MET672 3.0 7.6 1.0
HE2 B:MET672 3.2 52.6 1.0
HE1 B:MET573 3.3 51.7 1.0
CG B:MET623 3.4 7.6 1.0
CE B:MET573 3.4 7.6 1.0
HG3 B:MET623 3.5 52.6 1.0
HG2 B:MET623 3.5 52.6 1.0
CE B:MET623 3.5 7.6 1.0
HE1 B:MET623 3.6 52.6 1.0
HE2 B:MET623 3.7 52.6 1.0
HE3 B:MET573 3.7 51.7 1.0
CG B:MET672 3.7 7.6 1.0
CD B:GLU625 3.7 7.6 1.0
HG3 B:MET672 3.8 52.6 1.0
HE3 B:MET672 3.9 52.6 1.0
HD21 B:ASN668 3.9 52.5 1.0
CG B:MET573 4.0 7.6 1.0
HG3 B:GLU625 4.0 49.9 1.0
HG2 B:MET672 4.0 52.6 1.0
HG3 B:MET573 4.1 51.7 1.0
HG2 B:MET573 4.3 51.7 1.0
HE2 B:MET573 4.3 51.7 1.0
CG B:GLU625 4.3 7.6 1.0
HG2 B:GLU625 4.3 49.9 1.0
HE3 B:MET623 4.3 52.6 1.0
OE1 B:GLU625 4.7 7.6 1.0
HB2 B:ALA619 4.7 48.9 1.0
ND2 B:ASN668 4.7 7.6 1.0
CB B:MET623 4.8 7.6 1.0
HB3 B:MET672 4.9 52.6 1.0
CB B:MET672 4.9 7.6 1.0

Reference:

M.A.Moseng, M.Lyu, T.Pipatpolkai, P.Glaza, C.C.Emerson, P.L.Stewart, P.J.Stansfeld, E.W.Yu. Cryo-Em Structures of Cusa Reveal A Mechanism of Metal-Ion Export. Mbio V. 12 2021.
ISSN: ESSN 2150-7511
PubMed: 33820823
DOI: 10.1128/MBIO.00452-21
Page generated: Sat Apr 17 15:23:37 2021

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