Copper in PDB 7jro: Plant Mitochondrial Complex IV From Vigna Radiata

The structure of Plant Mitochondrial Complex IV From Vigna Radiata also contains other interesting chemical elements:

Magnesium	(Mg)	1 atom
Iron	(Fe)	2 atoms
Zinc	(Zn)	1 atom

The binding sites of Copper atom in the Plant Mitochondrial Complex IV From Vigna Radiata (pdb code 7jro). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 3 binding sites of Copper where determined in the Plant Mitochondrial Complex IV From Vigna Radiata, PDB code: 7jro:
Jump to Copper binding site number: 1; 2; 3;

Copper binding site 1 out of 3 in the Plant Mitochondrial Complex IV From Vigna Radiata


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Plant Mitochondrial Complex IV From Vigna Radiata within 5.0Å range: probe atom residue distance (Å) B Occ a:Cu603 b:50.7 occ:1.00 NE2 a:HIS293 1.8 29.1 1.0 ND1 a:HIS243 1.8 26.9 1.0 NE2 a:HIS292 2.0 29.8 1.0 CE1 a:HIS292 2.3 29.8 1.0 CE1 a:HIS293 2.6 29.1 1.0 CE1 a:HIS243 2.7 26.9 1.0 CG a:HIS243 2.9 26.9 1.0 CD2 a:HIS293 2.9 29.1 1.0 CD2 a:HIS292 3.3 29.8 1.0 CB a:HIS243 3.4 26.9 1.0 ND1 a:HIS292 3.5 29.8 1.0 ND1 a:HIS293 3.8 29.1 1.0 NE2 a:HIS243 3.9 26.9 1.0 CD2 a:HIS243 3.9 26.9 1.0 CG a:HIS293 4.0 29.1 1.0 CG a:HIS292 4.0 29.8 1.0 CA a:HIS243 4.1 25.4 1.0 CG2 a:VAL246 4.4 25.7 1.0 FE a:HEA601 4.7 50.7 1.0 NA a:HEA601 4.7 50.7 1.0 C4A a:HEA601 4.8 50.7 1.0 CE2 a:TYR247 4.8 26.3 1.0 CHB a:HEA601 4.9 50.7 1.0 ND a:HEA601 4.9 50.7 1.0 N a:HIS243 4.9 25.4 1.0

Copper binding site 2 out of 3 in the Plant Mitochondrial Complex IV From Vigna Radiata


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Plant Mitochondrial Complex IV From Vigna Radiata within 5.0Å range: probe atom residue distance (Å) B Occ b:Cu301 b:50.7 occ:1.00 CU1 b:CUA301 0.0 50.7 1.0 ND1 b:HIS227 2.1 26.6 1.0 O b:GLU221 2.3 26.3 1.0 SG b:CYS223 2.4 28.8 1.0 SG b:CYS219 2.4 24.4 1.0 CU2 b:CUA301 2.4 50.7 1.0 CE1 b:HIS227 2.8 26.6 1.0 N b:CYS223 3.2 27.4 1.0 CB b:CYS223 3.2 28.8 1.0 CG b:HIS227 3.3 26.6 1.0 CB b:CYS219 3.4 24.4 1.0 C b:GLU221 3.5 26.3 1.0 CE b:MET230 3.6 25.6 1.0 CA b:CYS223 3.8 27.4 1.0 CB b:HIS227 3.9 26.6 1.0 NE2 b:HIS227 3.9 26.6 1.0 C b:ILE222 4.1 27.5 1.0 ND1 b:HIS184 4.2 27.7 1.0 CD2 b:HIS227 4.2 26.6 1.0 CA b:HIS227 4.2 27.9 1.0 N b:GLU221 4.2 26.3 1.0 CA b:ILE222 4.4 27.5 1.0 CA b:GLU221 4.4 26.3 1.0 N b:ILE222 4.4 27.5 1.0 CE1 b:HIS184 4.6 27.7 1.0 CA b:CYS219 4.7 25.7 1.0 C b:CYS219 4.7 25.7 1.0 C b:CYS223 4.8 27.4 1.0 CB b:GLU221 4.8 28.9 1.0 N b:ALA228 4.9 27.8 1.0 SD b:MET230 4.9 25.6 1.0 O b:CYS219 4.9 25.7 1.0

Copper binding site 3 out of 3 in the Plant Mitochondrial Complex IV From Vigna Radiata


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Plant Mitochondrial Complex IV From Vigna Radiata within 5.0Å range: probe atom residue distance (Å) B Occ b:Cu301 b:50.7 occ:1.00 CU2 b:CUA301 0.0 50.7 1.0 CE b:MET230 1.6 25.6 1.0 ND1 b:HIS184 2.2 27.7 1.0 CU1 b:CUA301 2.4 50.7 1.0 SG b:CYS223 2.5 28.8 1.0 SG b:CYS219 2.5 24.4 1.0 CE1 b:HIS184 2.6 27.7 1.0 SD b:MET230 2.6 25.6 1.0 CB b:CYS223 3.2 28.8 1.0 CG b:HIS184 3.5 27.7 1.0 CB b:CYS219 3.6 24.4 1.0 NE2 b:HIS184 3.9 27.7 1.0 CG b:MET230 4.0 25.6 1.0 CB b:MET230 4.2 25.6 1.0 ND1 b:HIS227 4.3 26.6 1.0 CB b:HIS184 4.3 27.7 1.0 CD2 b:HIS184 4.3 27.7 1.0 CA b:CYS223 4.5 27.4 1.0 O b:GLU221 4.5 26.3 1.0 N b:CYS223 4.6 27.4 1.0 CA b:HIS184 4.7 27.9 1.0 O b:LEU183 4.9 28.1 1.0 CE1 b:HIS227 5.0 26.6 1.0

M.Maldonado, F.Guo, J.A.Letts. Atomic Structures of Respiratory Complex III2 , Complex IV and Supercomplex III2-IV From Vascular Plants To Be Published.