Copper in PDB 6z9n: Copper Transporter Oprc

The structure of Copper Transporter Oprc, PDB code: 6z9n was solved by S.P.Bhamidimarri, B.Van Den Berg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	67.30 / 2.73
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	67.325, 197.274, 172.119, 90, 91.42, 90
R / Rfree (%)	21.6 / 26.7

The binding sites of Copper atom in the Copper Transporter Oprc (pdb code 6z9n). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 4 binding sites of Copper where determined in the Copper Transporter Oprc, PDB code: 6z9n:
Jump to Copper binding site number: 1; 2; 3; 4;

Copper binding site 1 out of 4 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu801 b:83.3 occ:1.00 CE A:MET147 1.9 69.6 1.0 SG A:CYS143 2.4 70.6 1.0 SD A:MET325 2.5 76.5 1.0 CE A:MET325 3.1 64.3 1.0 SD A:MET147 3.2 69.3 1.0 CB A:CYS143 3.5 65.1 1.0 CG A:MET325 3.6 65.8 1.0 CG A:MET147 3.8 69.6 1.0 CB A:MET147 3.8 63.0 1.0 CB A:MET325 3.8 62.3 1.0 CA A:CYS143 4.5 60.3 1.0 CD A:PRO144 4.6 58.9 1.0 N A:MET147 4.9 61.3 1.0 CB A:ASN145 4.9 57.1 1.0 OD1 A:ASN145 4.9 60.9 1.0 CA A:MET147 4.9 63.9 1.0 N A:ASN145 4.9 59.9 1.0

Copper binding site 2 out of 4 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ B:Cu801 b:88.3 occ:1.00 CE B:MET147 2.1 86.5 1.0 SD B:MET147 2.5 89.9 1.0 SG B:CYS143 2.5 69.2 1.0 SD B:MET325 2.8 88.4 1.0 CE B:MET325 3.0 73.7 1.0 CG B:MET325 3.4 69.9 1.0 CG B:MET147 3.5 69.0 1.0 CB B:MET147 3.8 64.2 1.0 CB B:CYS143 3.9 63.5 1.0 CB B:MET325 4.0 70.7 1.0 CD B:PRO144 4.4 63.2 1.0 ND2 B:ASN145 4.8 64.5 1.0 CB B:ASN145 4.8 66.0 1.0 CA B:CYS143 4.9 60.3 1.0 N B:ASN145 4.9 64.1 1.0

Copper binding site 3 out of 4 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ C:Cu801 b:95.3 occ:1.00 CE C:MET147 2.1 89.1 1.0 SD C:MET325 2.4 89.9 1.0 SG C:CYS143 2.5 72.7 1.0 SD C:MET147 2.5 84.9 1.0 CE C:MET325 2.6 80.3 1.0 CG C:MET147 3.2 71.8 1.0 CB C:MET147 3.4 71.8 1.0 CB C:CYS143 3.6 66.4 1.0 CG C:MET325 4.0 78.0 1.0 CB C:MET325 4.3 72.4 1.0 CD C:PRO144 4.5 62.7 1.0 CA C:CYS143 4.5 62.7 1.0 CA C:MET147 4.7 69.8 1.0 CB C:ASN145 4.8 74.6 1.0 N C:MET147 4.8 68.8 1.0 N C:ASN145 4.9 71.5 1.0 N C:PRO144 5.0 61.6 1.0

Copper binding site 4 out of 4 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ D:Cu801 b:97.2 occ:1.00 CE D:MET147 2.0 87.2 1.0 SD D:MET325 2.4 96.3 1.0 SG D:CYS143 2.5 79.6 1.0 CG D:MET325 3.1 81.0 1.0 CB D:CYS143 3.1 67.0 1.0 CE D:MET325 3.4 74.7 1.0 SD D:MET147 3.6 89.9 1.0 CB D:MET147 4.0 74.0 1.0 CG D:MET147 4.1 76.2 1.0 CA D:CYS143 4.1 68.3 1.0 CB D:MET325 4.1 72.7 1.0 CD D:PRO144 4.3 73.8 1.0 C D:CYS143 4.8 66.1 1.0 N D:PRO144 4.9 69.9 1.0

S.P.Bhamidimarri, T.R.Young, M.Shanmugam, S.Soderholm, B.Belzunces, S.Khalid, A.Basle, D.Bumann, B.Van Den Berg. Acquisition of Ionic Copper By A Bacterial Outer Membrane Protein To Be Published.