Copper in PDB 6z1s: Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila

The structure of Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila, PDB code: 6z1s was solved by M.Dimarogona, E.Nikolaivits, A.Valmas, E.Topakas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	43.24 / 1.53
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	86.404, 97.177, 46.998, 90, 90, 90
R / Rfree (%)	15.7 / 20.7

The binding sites of Copper atom in the Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila (pdb code 6z1s). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila, PDB code: 6z1s:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in the Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu513 b:25.8 occ:1.00 O A:HOH870 1.9 11.7 1.0 NE2 A:HIS319 2.2 15.2 1.0 NE2 A:HIS295 2.2 21.9 1.0 NE2 A:HIS291 2.2 14.3 1.0 CE1 A:HIS319 2.9 15.3 1.0 CE1 A:HIS295 3.1 22.7 1.0 CE1 A:HIS291 3.1 14.1 1.0 CD2 A:HIS295 3.2 21.0 1.0 CD2 A:HIS291 3.2 15.5 1.0 CD2 A:HIS319 3.3 15.9 1.0 CU A:CU514 3.7 16.7 1.0 CE2 A:PHE315 4.0 10.9 1.0 ND1 A:HIS319 4.1 15.0 1.0 ND1 A:HIS295 4.2 22.9 1.0 ND1 A:HIS291 4.2 14.4 1.0 CG A:HIS295 4.3 20.3 1.0 CG A:HIS291 4.3 14.7 1.0 CG A:HIS319 4.3 14.6 1.0 CD1 A:LEU306 4.4 20.3 1.0 NE2 A:HIS127 4.4 9.3 1.0 CD2 A:HIS127 4.5 9.6 1.0 CZ A:PHE315 4.6 10.9 1.0 CE1 A:PHE123 4.7 12.4 1.0 NE2 A:HIS118 4.7 12.9 1.0 CD2 A:HIS318 4.8 15.6 1.0 CD2 A:PHE315 4.8 10.5 1.0 NE2 A:HIS318 4.8 15.0 1.0 CD2 A:HIS118 4.8 12.7 1.0 CZ A:PHE123 4.9 12.8 1.0

Copper binding site 2 out of 2 in the Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu514 b:16.7 occ:1.00 O A:HOH870 1.9 11.7 1.0 NE2 A:HIS110 2.1 10.7 1.0 NE2 A:HIS127 2.1 9.3 1.0 NE2 A:HIS118 2.2 12.9 1.0 CE1 A:HIS127 3.0 9.2 1.0 CE1 A:HIS110 3.0 11.2 1.0 CD2 A:HIS110 3.1 10.9 1.0 CE1 A:HIS118 3.1 13.8 1.0 CD2 A:HIS127 3.1 9.6 1.0 CD2 A:HIS118 3.2 12.7 1.0 CU A:CU513 3.7 25.8 1.0 ND1 A:HIS127 4.1 9.3 1.0 ND1 A:HIS110 4.1 11.1 1.0 CG A:HIS127 4.2 8.7 1.0 CG A:HIS110 4.2 11.4 1.0 ND1 A:HIS118 4.2 12.5 1.0 CG A:HIS118 4.3 12.5 1.0 CE2 A:PHE315 4.4 10.9 1.0 CZ A:PHE315 4.4 10.9 1.0 CD1 A:ILE117 4.5 15.8 1.0 CD1 A:LEU306 4.6 20.3 1.0 NE2 A:HIS319 4.6 15.2 1.0 CE1 A:PHE123 4.7 12.4 1.0 CE1 A:HIS319 4.8 15.3 1.0 CG1 A:ILE117 4.9 14.4 1.0

M.Dimarogona, E.Nikolaivits, A.Valmas, E.Topakas. Structure of Polyphenol Oxidase (Mutant G292N) From Thermothelomyces Thermophila To Be Published.