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Copper in PDB 6xh8: Cuer-Transcription Activation Complex with Rna Transcript

Enzymatic activity of Cuer-Transcription Activation Complex with Rna Transcript

All present enzymatic activity of Cuer-Transcription Activation Complex with Rna Transcript:
2.7.7.6;

Other elements in 6xh8:

The structure of Cuer-Transcription Activation Complex with Rna Transcript also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Copper Binding Sites:

The binding sites of Copper atom in the Cuer-Transcription Activation Complex with Rna Transcript (pdb code 6xh8). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cuer-Transcription Activation Complex with Rna Transcript, PDB code: 6xh8:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6xh8

Go back to Copper Binding Sites List in 6xh8
Copper binding site 1 out of 2 in the Cuer-Transcription Activation Complex with Rna Transcript


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cuer-Transcription Activation Complex with Rna Transcript within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cu200

b:373.0
occ:1.00
HA G:CYS120 1.8 356.5 1.0
HD2 G:PRO121 1.9 355.1 1.0
HB2 H:SER77 2.0 363.1 1.0
SG G:CYS120 2.5 356.5 1.0
SG G:CYS112 2.5 355.0 1.0
CA G:CYS120 2.6 356.5 1.0
HA H:SER77 2.7 363.1 1.0
CB H:SER77 2.7 363.1 1.0
CD G:PRO121 2.7 355.1 1.0
HB3 H:SER77 2.9 363.1 1.0
CB G:CYS120 2.9 356.5 1.0
C G:CYS120 3.0 356.5 1.0
N G:PRO121 3.1 355.1 1.0
CA H:SER77 3.1 363.1 1.0
H G:ILE122 3.2 346.4 1.0
HB2 G:CYS120 3.2 356.5 1.0
HD3 G:PRO121 3.2 355.1 1.0
HD2 G:PRO113 3.4 359.2 1.0
O H:SER77 3.6 363.1 1.0
HD12 G:ILE122 3.6 346.4 1.0
HG2 G:PRO121 3.7 355.1 1.0
C H:SER77 3.7 363.1 1.0
HG13 G:ILE122 3.8 346.4 1.0
HB3 G:CYS120 3.8 356.5 1.0
CG G:PRO121 3.8 355.1 1.0
N G:CYS120 3.8 356.5 1.0
O G:ASP119 3.9 362.3 1.0
OG H:SER77 3.9 363.1 1.0
N G:ILE122 4.0 346.4 1.0
O G:CYS120 4.0 356.5 1.0
HB G:ILE122 4.1 346.4 1.0
CB G:CYS112 4.1 355.0 1.0
HB H:VAL80 4.1 348.7 1.0
H G:GLY114 4.2 361.6 1.0
HB2 G:CYS112 4.2 355.0 1.0
HG H:SER77 4.3 363.1 1.0
C G:ASP119 4.3 362.3 1.0
CD G:PRO113 4.3 359.2 1.0
CA G:PRO121 4.3 355.1 1.0
HG3 G:PRO121 4.4 355.1 1.0
CD1 G:ILE122 4.4 346.4 1.0
CG1 G:ILE122 4.4 346.4 1.0
N H:SER77 4.4 363.1 1.0
H G:CYS120 4.4 356.5 1.0
HA G:CYS112 4.4 355.0 1.0
HG2 G:PRO113 4.5 359.2 1.0
CB G:ILE122 4.6 346.4 1.0
H H:SER77 4.7 363.1 1.0
C G:PRO121 4.7 355.1 1.0
HB2 H:LYS81 4.7 353.8 1.0
HD11 G:ILE122 4.7 346.4 1.0
HB3 G:CYS112 4.7 355.0 1.0
HA2 G:GLY114 4.8 361.6 1.0
CB G:PRO121 4.8 355.1 1.0
HD3 G:PRO113 4.8 359.2 1.0
CA G:CYS112 4.8 355.0 1.0
H G:ILE123 4.8 335.7 1.0
CG G:PRO113 4.9 359.2 1.0
N H:ALA78 5.0 363.8 1.0
HG12 H:VAL80 5.0 348.7 1.0
CA G:ILE122 5.0 346.4 1.0
CB H:VAL80 5.0 348.7 1.0
N G:GLY114 5.0 361.6 1.0

Copper binding site 2 out of 2 in 6xh8

Go back to Copper Binding Sites List in 6xh8
Copper binding site 2 out of 2 in the Cuer-Transcription Activation Complex with Rna Transcript


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cuer-Transcription Activation Complex with Rna Transcript within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cu200

b:321.0
occ:1.00
HB2 G:SER77 1.8 307.9 1.0
HA H:CYS120 1.8 308.1 1.0
HD2 H:PRO121 2.1 305.1 1.0
HB3 G:SER77 2.4 307.9 1.0
CB G:SER77 2.5 307.9 1.0
HD2 H:PRO113 2.5 306.5 1.0
SG H:CYS112 2.6 304.4 1.0
CA H:CYS120 2.7 308.1 1.0
SG H:CYS120 2.8 308.1 1.0
CD H:PRO121 2.9 305.1 1.0
CB H:CYS120 3.0 308.1 1.0
HD3 H:PRO121 3.0 305.1 1.0
HB2 H:CYS120 3.1 308.1 1.0
HG2 H:PRO113 3.2 306.5 1.0
H H:GLY114 3.2 307.9 1.0
HG G:SER77 3.3 307.9 1.0
OG G:SER77 3.3 307.9 1.0
CD H:PRO113 3.4 306.5 1.0
C H:CYS120 3.4 308.1 1.0
HG H:SER117 3.5 308.3 1.0
N H:PRO121 3.5 305.1 1.0
HA G:SER77 3.6 307.9 1.0
OG H:SER117 3.6 308.3 1.0
CA G:SER77 3.6 307.9 1.0
CG H:PRO113 3.7 306.5 1.0
N H:CYS120 3.8 308.1 1.0
HB3 H:CYS120 3.9 308.1 1.0
O H:ASP119 4.0 314.9 1.0
CB H:CYS112 4.0 304.4 1.0
HD3 H:PRO113 4.0 306.5 1.0
H H:ILE122 4.0 295.2 1.0
N H:GLY114 4.0 307.9 1.0
HB2 H:CYS112 4.1 304.4 1.0
HA H:CYS112 4.1 304.4 1.0
HG3 H:PRO113 4.1 306.5 1.0
CG H:PRO121 4.1 305.1 1.0
N H:PRO113 4.2 306.5 1.0
HG2 H:PRO121 4.2 305.1 1.0
HD12 H:ILE122 4.2 295.2 1.0
HA2 H:GLY114 4.2 307.9 1.0
C H:ASP119 4.3 314.9 1.0
H H:CYS120 4.3 308.1 1.0
C G:SER77 4.4 307.9 1.0
O G:SER77 4.4 307.9 1.0
CA H:CYS112 4.5 304.4 1.0
HG3 H:PRO121 4.5 305.1 1.0
H H:ASP115 4.5 306.9 1.0
O H:CYS120 4.5 308.1 1.0
O H:SER117 4.6 308.3 1.0
HG13 H:ILE122 4.6 295.2 1.0
CA H:GLY114 4.7 307.9 1.0
H G:SER77 4.7 307.9 1.0
N G:SER77 4.7 307.9 1.0
C H:CYS112 4.7 304.4 1.0
HB3 H:CYS112 4.8 304.4 1.0
CA H:PRO121 4.8 305.1 1.0
N H:ILE122 4.8 295.2 1.0
H H:SER117 4.9 308.3 1.0
CB H:PRO113 4.9 306.5 1.0
CA H:PRO113 5.0 306.5 1.0
HB H:ILE122 5.0 295.2 1.0
CB H:SER117 5.0 308.3 1.0
C H:PRO113 5.0 306.5 1.0

Reference:

W.Shi, B.Zhang, Y.Jiang, C.Liu, W.Zhou, M.Chen, Y.Yang, Y.Hu, B.Liu. Structural Basis of Cuer-Dependent Transcription Activation Iscience 2021.
ISSN: ESSN 2589-0042
Page generated: Sat Apr 17 15:22:31 2021

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