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Copper in PDB 6xh7: Cuer-Tac Without Rna

Enzymatic activity of Cuer-Tac Without Rna

All present enzymatic activity of Cuer-Tac Without Rna:
2.7.7.6;

Other elements in 6xh7:

The structure of Cuer-Tac Without Rna also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Copper Binding Sites:

The binding sites of Copper atom in the Cuer-Tac Without Rna (pdb code 6xh7). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cuer-Tac Without Rna, PDB code: 6xh7:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6xh7

Go back to Copper Binding Sites List in 6xh7
Copper binding site 1 out of 2 in the Cuer-Tac Without Rna


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cuer-Tac Without Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Cu200

b:230.0
occ:1.00
HB2 H:SER77 1.8 214.3 1.0
HD2 G:PRO121 1.8 213.4 1.0
HA G:CYS120 1.8 217.5 1.0
SG G:CYS120 2.4 217.5 1.0
SG G:CYS112 2.5 209.6 1.0
CA G:CYS120 2.5 217.5 1.0
HD2 G:PRO113 2.5 211.2 1.0
CB H:SER77 2.5 214.3 1.0
HB3 H:SER77 2.6 214.3 1.0
CD G:PRO121 2.6 213.4 1.0
CB G:CYS120 2.7 217.5 1.0
HD3 G:PRO121 2.8 213.4 1.0
HB2 G:CYS120 3.0 217.5 1.0
N G:PRO121 3.2 213.4 1.0
C G:CYS120 3.2 217.5 1.0
HA H:SER77 3.4 214.3 1.0
CD G:PRO113 3.5 211.2 1.0
OG H:SER77 3.5 214.3 1.0
CA H:SER77 3.5 214.3 1.0
HG H:SER77 3.6 214.3 1.0
HB3 G:CYS120 3.7 217.5 1.0
H G:ILE122 3.7 207.9 1.0
N G:CYS120 3.8 217.5 1.0
CB G:CYS112 3.8 209.6 1.0
CG G:PRO121 3.8 213.4 1.0
HA G:CYS112 3.8 209.6 1.0
HG2 G:PRO121 3.9 213.4 1.0
HB2 G:CYS112 3.9 209.6 1.0
HG2 G:PRO113 3.9 211.2 1.0
HD3 G:PRO113 3.9 211.2 1.0
O G:ASP119 3.9 218.3 1.0
H G:GLY114 4.0 209.4 1.0
CG G:PRO113 4.2 211.2 1.0
HG3 G:PRO121 4.2 213.4 1.0
O H:SER77 4.2 214.3 1.0
C H:SER77 4.3 214.3 1.0
CA G:CYS112 4.3 209.6 1.0
C G:ASP119 4.3 218.3 1.0
HD12 G:ILE122 4.3 207.9 1.0
H G:CYS120 4.3 217.5 1.0
O G:CYS120 4.4 217.5 1.0
HB H:VAL80 4.4 211.3 1.0
N G:PRO113 4.4 211.2 1.0
N G:ILE122 4.5 207.9 1.0
HG3 G:PRO113 4.5 211.2 1.0
HG13 G:ILE122 4.5 207.9 1.0
CA G:PRO121 4.5 213.4 1.0
HB3 G:CYS112 4.6 209.6 1.0
HB G:ILE122 4.7 207.9 1.0
HG G:SER117 4.7 216.7 1.0
OG G:SER117 4.7 216.7 1.0
N H:SER77 4.7 214.3 1.0
C G:CYS112 4.7 209.6 1.0
H H:SER77 4.8 214.3 1.0
N G:GLY114 4.9 209.4 1.0
CB G:PRO121 4.9 213.4 1.0
HG21 H:VAL80 4.9 211.3 1.0

Copper binding site 2 out of 2 in 6xh7

Go back to Copper Binding Sites List in 6xh7
Copper binding site 2 out of 2 in the Cuer-Tac Without Rna


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cuer-Tac Without Rna within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Cu200

b:222.7
occ:1.00
HB2 G:SER77 1.8 203.8 1.0
HD2 H:PRO113 2.2 204.1 1.0
HB2 H:CYS120 2.2 207.8 1.0
HA H:CYS120 2.3 207.8 1.0
SG H:CYS120 2.4 207.8 1.0
SG H:CYS112 2.4 204.0 1.0
CB H:CYS120 2.5 207.8 1.0
CB G:SER77 2.6 203.8 1.0
HD2 H:PRO121 2.7 203.1 1.0
HB3 G:SER77 2.7 203.8 1.0
CA H:CYS120 2.9 207.8 1.0
H H:GLY114 3.1 204.2 1.0
CD H:PRO113 3.1 204.1 1.0
HG G:SER77 3.1 203.8 1.0
HG2 H:PRO113 3.3 204.1 1.0
OG G:SER77 3.4 203.8 1.0
HA H:CYS112 3.5 204.0 1.0
HB3 H:CYS120 3.5 207.8 1.0
HG H:SER117 3.6 206.1 1.0
CB H:CYS112 3.6 204.0 1.0
CD H:PRO121 3.6 203.1 1.0
HB2 H:CYS112 3.7 204.0 1.0
HD3 H:PRO113 3.7 204.1 1.0
CG H:PRO113 3.7 204.1 1.0
OG H:SER117 3.7 206.1 1.0
HA G:SER77 3.8 203.8 1.0
CA G:SER77 3.8 203.8 1.0
N H:PRO113 3.8 204.1 1.0
N H:CYS120 3.9 207.8 1.0
CA H:CYS112 3.9 204.0 1.0
HD3 H:PRO121 3.9 203.1 1.0
C H:CYS120 3.9 207.8 1.0
N H:GLY114 3.9 204.2 1.0
N H:PRO121 4.1 203.1 1.0
HG3 H:PRO113 4.2 204.1 1.0
HA2 H:GLY114 4.2 204.2 1.0
H H:CYS120 4.2 207.8 1.0
C H:CYS112 4.3 204.0 1.0
HB3 H:CYS112 4.4 204.0 1.0
O G:SER77 4.4 203.8 1.0
C G:SER77 4.4 203.8 1.0
H H:ILE122 4.5 202.5 1.0
HG2 H:PRO121 4.6 203.1 1.0
O H:ASP119 4.6 205.6 1.0
CA H:GLY114 4.7 204.2 1.0
C H:ASP119 4.7 205.6 1.0
CG H:PRO121 4.7 203.1 1.0
H H:ASP115 4.7 204.7 1.0
CA H:PRO113 4.8 204.1 1.0
HB G:VAL80 4.8 197.0 1.0
C H:PRO113 4.9 204.1 1.0
CB H:PRO113 4.9 204.1 1.0
HD12 H:ILE122 4.9 202.5 1.0
N G:SER77 5.0 203.8 1.0
H G:SER77 5.0 203.8 1.0

Reference:

W.Shi, B.Zhang, Y.Jiang, C.Liu, W.Zhou, M.Chen, Y.Yang, Y.Hu, B.Liu. Structural Basis of Cuer-Dependent Transcription Activation Iscience 2021.
ISSN: ESSN 2589-0042
Page generated: Sat Apr 17 15:22:28 2021

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