Copper in PDB 6vow: Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans

The structure of Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans, PDB code: 6vow was solved by E.A.Coler, A.S.Soares, R.E.Collins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.92
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	135.11, 68.84, 49.52, 90, 93.05, 90
R / Rfree (%)	16.3 / 23.2

The binding sites of Copper atom in the Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans (pdb code 6vow). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 4 binding sites of Copper where determined in the Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans, PDB code: 6vow:
Jump to Copper binding site number: 1; 2; 3; 4;

Copper binding site 1 out of 4 in the Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu501 b:46.9 occ:1.00 CU2 A:C2O501 0.0 46.9 1.0 NE2 A:HIS103 2.0 37.6 1.0 NE2 A:HIS407 2.1 53.1 1.0 ND1 A:HIS63 2.1 49.3 1.0 O1 A:C2O501 2.3 42.2 1.0 CE1 A:HIS103 2.9 38.3 1.0 CE1 A:HIS407 2.9 54.5 1.0 CG A:HIS63 3.1 45.9 1.0 CD2 A:HIS103 3.1 40.1 1.0 CE1 A:HIS63 3.1 43.8 1.0 CD2 A:HIS407 3.1 46.2 1.0 CB A:HIS63 3.4 34.6 1.0 CZ2 A:TRP101 3.5 34.6 1.0 CU A:CU502 3.8 48.2 1.0 CD2 A:HIS61 3.9 40.4 1.0 CE2 A:TRP101 4.0 33.9 1.0 ND1 A:HIS407 4.0 50.5 1.0 ND1 A:HIS103 4.1 38.2 1.0 CG A:HIS407 4.1 42.9 1.0 CG A:HIS103 4.1 39.0 1.0 NE2 A:HIS63 4.2 48.5 1.0 CD2 A:HIS63 4.2 36.8 1.0 NE1 A:TRP101 4.2 39.9 1.0 NE2 A:HIS358 4.2 37.4 1.0 CH2 A:TRP101 4.2 36.0 1.0 NE2 A:HIS61 4.3 47.3 1.0 CA A:HIS63 4.5 37.9 1.0 CD2 A:HIS358 4.5 47.4 1.0 CU3 A:C2O501 4.6 49.2 1.0 CE1 A:HIS358 4.8 46.4 1.0 CD2 A:TRP101 4.8 30.6 1.0

Copper binding site 2 out of 4 in the Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu501 b:49.2 occ:1.00 CU3 A:C2O501 0.0 49.2 1.0 NE2 A:HIS360 2.2 54.4 1.0 NE2 A:HIS105 2.2 55.2 1.0 NE2 A:HIS405 2.2 56.1 1.0 O1 A:C2O501 2.3 42.2 1.0 CE1 A:HIS360 3.0 52.4 1.0 CD2 A:HIS405 3.0 61.1 1.0 CD2 A:HIS105 3.0 40.9 1.0 CE1 A:HIS105 3.3 53.3 1.0 CD2 A:HIS360 3.3 46.5 1.0 CE1 A:HIS405 3.3 57.5 1.0 CU A:CU502 3.8 48.2 1.0 CD2 A:HIS358 3.9 47.4 1.0 NE2 A:HIS61 4.1 47.3 1.0 ND1 A:HIS360 4.2 50.2 1.0 CD2 A:HIS61 4.2 40.4 1.0 CG A:HIS405 4.2 45.0 1.0 CG A:HIS105 4.2 42.1 1.0 ND1 A:HIS105 4.3 56.9 1.0 ND1 A:HIS405 4.3 56.7 1.0 CG A:HIS360 4.3 43.1 1.0 NE2 A:HIS358 4.3 37.4 1.0 CU2 A:C2O501 4.6 46.9 1.0 CB A:MET403 4.6 47.3 1.0 NE2 A:HIS407 4.6 53.1 1.0 CD2 A:HIS407 4.7 46.2 1.0 CE1 A:HIS103 4.7 38.3 1.0 CE1 A:HIS61 4.7 36.1 1.0 CG A:HIS61 4.9 38.7 1.0 SD A:MET412 4.9 58.8 1.0

Copper binding site 3 out of 4 in the Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu502 b:48.2 occ:1.00 NE2 A:HIS358 2.0 37.4 1.0 NE2 A:HIS61 2.0 47.3 1.0 CE1 A:HIS61 2.9 36.1 1.0 CE1 A:HIS358 2.9 46.4 1.0 CD2 A:HIS358 3.0 47.4 1.0 O1 A:C2O501 3.0 42.2 1.0 CD2 A:HIS61 3.1 40.4 1.0 O A:HOH636 3.2 41.6 1.0 NE2 A:HIS360 3.3 54.4 1.0 CD2 A:HIS360 3.3 46.5 1.0 ND1 A:HIS63 3.7 49.3 1.0 CU3 A:C2O501 3.8 49.2 1.0 CU2 A:C2O501 3.8 46.9 1.0 CA A:HIS63 3.9 37.9 1.0 CG A:HIS63 3.9 45.9 1.0 CE1 A:HIS360 3.9 52.4 1.0 CG A:HIS360 4.0 43.1 1.0 ND1 A:HIS61 4.0 42.0 1.0 ND1 A:HIS358 4.0 58.1 1.0 CG A:HIS358 4.1 54.1 1.0 CG A:HIS61 4.1 38.7 1.0 CB A:HIS63 4.2 34.6 1.0 CE1 A:HIS63 4.2 43.8 1.0 ND1 A:HIS360 4.3 50.2 1.0 N A:GLY64 4.4 37.3 1.0 CA A:HIS360 4.5 38.7 1.0 CD2 A:HIS63 4.5 36.8 1.0 NE2 A:HIS63 4.7 48.5 1.0 C A:HIS63 4.7 32.8 1.0 CB A:HIS360 4.8 39.0 1.0 N A:HIS360 4.8 36.7 1.0 N A:HIS63 4.9 38.4 1.0 O A:LEU359 4.9 44.0 1.0 O A:HOH642 5.0 31.6 0.5

Copper binding site 4 out of 4 in the Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 4 of Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu503 b:51.5 occ:1.00 ND1 A:HIS355 2.0 53.5 1.0 ND1 A:HIS411 2.1 58.0 1.0 SG A:CYS406 2.2 46.3 1.0 CE1 A:HIS355 3.0 60.9 1.0 CG A:HIS355 3.0 54.5 1.0 CE1 A:HIS411 3.0 49.9 1.0 CG A:HIS411 3.1 47.6 1.0 CB A:CYS406 3.1 52.0 1.0 CD2 A:LEU416 3.3 68.2 1.0 CB A:HIS355 3.4 48.7 1.0 CB A:HIS411 3.4 45.2 1.0 CA A:HIS355 3.6 42.8 1.0 O A:GLN354 3.8 47.9 1.0 NE2 A:HIS355 4.0 51.8 1.0 CB A:VAL408 4.1 45.9 1.0 CD2 A:HIS355 4.1 49.5 1.0 NE2 A:HIS411 4.1 51.1 1.0 CD2 A:HIS411 4.2 51.3 1.0 CG2 A:VAL408 4.3 40.7 1.0 CD A:PRO356 4.4 46.1 1.0 CA A:CYS406 4.5 43.3 1.0 N A:HIS355 4.5 44.2 1.0 C A:GLN354 4.6 48.1 1.0 C A:HIS355 4.6 41.6 1.0 CG A:LEU416 4.7 65.2 1.0 N A:PRO356 4.8 42.6 1.0 CG1 A:VAL408 4.9 44.6 1.0 CA A:HIS411 4.9 48.9 1.0 N A:VAL408 4.9 44.2 1.0 O A:VAL408 5.0 45.0 1.0

E.A.Coler, A.S.Soares, R.E.Collins. Crystal Structure of Multi-Copper Oxidase From Pseudomonas Thermotolerans To Be Published.