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Copper in PDB 6quj: Ghk Tagged Gfp Variant

Protein crystallography data

The structure of Ghk Tagged Gfp Variant, PDB code: 6quj was solved by T.Huyton, D.Gorlich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.03 / 1.68
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 85.990, 85.990, 270.140, 90.00, 90.00, 120.00
R / Rfree (%) 18.1 / 24.3

Copper Binding Sites:

The binding sites of Copper atom in the Ghk Tagged Gfp Variant (pdb code 6quj). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Ghk Tagged Gfp Variant, PDB code: 6quj:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6quj

Go back to Copper Binding Sites List in 6quj
Copper binding site 1 out of 2 in the Ghk Tagged Gfp Variant


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Ghk Tagged Gfp Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu301

b:57.4
occ:1.00
N A:HIS1 2.0 52.6 1.0
ND1 A:HIS1 2.0 61.5 1.0
N A:GLY0 2.1 87.3 1.0
O A:HOH516 2.7 54.9 1.0
C A:GLY0 2.9 59.7 1.0
CG A:HIS1 3.0 59.0 1.0
CA A:GLY0 3.0 69.2 1.0
CE1 A:HIS1 3.1 77.1 1.0
CA A:HIS1 3.1 56.9 1.0
CB A:HIS1 3.3 58.2 1.0
N A:LYS2 3.9 49.9 1.0
C A:HIS1 4.0 53.5 1.0
O A:GLY0 4.1 73.1 1.0
CD2 A:HIS1 4.2 56.9 1.0
NE2 A:HIS1 4.2 60.5 1.0
O A:PRO192 4.3 54.4 1.0
O A:HOH513 4.6 66.0 1.0

Copper binding site 2 out of 2 in 6quj

Go back to Copper Binding Sites List in 6quj
Copper binding site 2 out of 2 in the Ghk Tagged Gfp Variant


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Ghk Tagged Gfp Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu301

b:41.1
occ:1.00
N D:HIS1 2.0 41.1 1.0
ND1 D:HIS1 2.0 41.8 1.0
N D:GLY0 2.1 63.0 1.0
O D:HOH507 2.7 44.1 1.0
C D:GLY0 2.9 45.0 1.0
CG D:HIS1 3.0 39.8 1.0
CA D:HIS1 3.1 41.2 1.0
CA D:GLY0 3.1 54.0 1.0
CE1 D:HIS1 3.1 65.9 1.0
CB D:HIS1 3.3 46.1 1.0
N D:LYS2 3.9 41.1 1.0
C D:HIS1 4.0 43.9 1.0
O D:GLY0 4.1 48.0 1.0
CD2 D:HIS1 4.2 43.9 1.0
NE2 D:HIS1 4.2 50.4 1.0
O D:PRO192 4.3 46.7 1.0
CD2 D:LEU194 4.9 40.0 1.0

Reference:

T.Huyton, D.Goerlich. Using the Copper Binding Peptide Ghk For Phasing Structures To Be Published.
Page generated: Wed Jul 31 06:51:47 2024

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