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Copper in PDB 6qui: Ghk Tagged Gfp Variant at 17KEV

Protein crystallography data

The structure of Ghk Tagged Gfp Variant at 17KEV, PDB code: 6qui was solved by T.Huyton, D.Gorlich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.92 / 1.94
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 86.252, 86.252, 269.535, 90.00, 90.00, 120.00
R / Rfree (%) 20.4 / 24.3

Copper Binding Sites:

The binding sites of Copper atom in the Ghk Tagged Gfp Variant at 17KEV (pdb code 6qui). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Ghk Tagged Gfp Variant at 17KEV, PDB code: 6qui:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6qui

Go back to Copper Binding Sites List in 6qui
Copper binding site 1 out of 2 in the Ghk Tagged Gfp Variant at 17KEV


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Ghk Tagged Gfp Variant at 17KEV within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu301

b:48.1
occ:0.42
O A:HOH401 0.3 23.4 1.0
N A:GLY0 1.9 44.8 1.0
ND1 A:HIS1 2.0 57.2 1.0
N A:HIS1 2.1 47.6 1.0
O A:HOH454 2.6 49.8 1.0
C A:GLY0 2.9 45.9 1.0
CA A:GLY0 2.9 49.5 1.0
CG A:HIS1 3.0 63.7 1.0
CE1 A:HIS1 3.0 67.8 1.0
CA A:HIS1 3.1 49.7 1.0
CB A:HIS1 3.3 58.0 1.0
N A:LYS2 3.9 47.6 1.0
O A:GLY0 4.1 53.0 1.0
C A:HIS1 4.1 53.2 1.0
NE2 A:HIS1 4.1 65.5 1.0
CD2 A:HIS1 4.1 64.2 1.0
O A:PRO192 4.2 49.6 1.0

Copper binding site 2 out of 2 in 6qui

Go back to Copper Binding Sites List in 6qui
Copper binding site 2 out of 2 in the Ghk Tagged Gfp Variant at 17KEV


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Ghk Tagged Gfp Variant at 17KEV within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cu303

b:45.6
occ:0.45
O D:HOH401 0.2 17.8 1.0
ND1 D:HIS1 1.9 40.5 1.0
N D:GLY0 2.0 49.3 1.0
N D:HIS1 2.0 42.0 1.0
O D:HOH517 2.6 36.6 1.0
CG D:HIS1 2.9 42.9 1.0
C D:GLY0 2.9 41.8 1.0
CE1 D:HIS1 3.0 44.8 1.0
CA D:GLY0 3.0 45.8 1.0
CA D:HIS1 3.0 38.1 1.0
CB D:HIS1 3.2 41.9 1.0
N D:LYS2 3.9 40.3 1.0
C D:HIS1 4.0 42.3 1.0
CD2 D:HIS1 4.0 45.1 1.0
NE2 D:HIS1 4.0 44.9 1.0
O D:GLY0 4.1 47.8 1.0
O D:PRO192 4.4 41.4 1.0

Reference:

T.Huyton, D.Goerlich. Using the Copper Binding Peptide Ghk For Phasing Structures To Be Published.
Page generated: Wed Jul 31 06:51:44 2024

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