Atomistry » Copper » PDB 6fok-6ibj » 6gp6
Atomistry »
  Copper »
    PDB 6fok-6ibj »
      6gp6 »

Copper in PDB 6gp6: Mamm Ctd - Copper Form

Protein crystallography data

The structure of Mamm Ctd - Copper Form, PDB code: 6gp6 was solved by S.Barber-Zucker, R.Zarivach, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.71 / 2.15
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 28.930, 73.750, 89.410, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 27.5

Copper Binding Sites:

The binding sites of Copper atom in the Mamm Ctd - Copper Form (pdb code 6gp6). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 3 binding sites of Copper where determined in the Mamm Ctd - Copper Form, PDB code: 6gp6:
Jump to Copper binding site number: 1; 2; 3;

Copper binding site 1 out of 3 in 6gp6

Go back to Copper Binding Sites List in 6gp6
Copper binding site 1 out of 3 in the Mamm Ctd - Copper Form


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Mamm Ctd - Copper Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu401

b:62.6
occ:1.00
NE2 A:HIS264 2.2 42.4 1.0
O B:HOH506 2.3 43.6 1.0
CD2 A:HIS264 2.8 35.6 1.0
O A:HOH514 2.9 38.2 1.0
CE1 A:HIS264 3.3 37.0 1.0
O A:HOH512 4.0 44.1 1.0
CG A:HIS264 4.1 37.5 1.0
OE1 A:GLU268 4.1 50.0 1.0
CG A:GLU268 4.1 46.9 1.0
ND1 A:HIS264 4.3 32.4 1.0
CD A:GLU268 4.5 49.5 1.0

Copper binding site 2 out of 3 in 6gp6

Go back to Copper Binding Sites List in 6gp6
Copper binding site 2 out of 3 in the Mamm Ctd - Copper Form


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Mamm Ctd - Copper Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu402

b:66.2
occ:1.00
NE2 A:HIS285 2.3 37.0 1.0
NE2 B:HIS285 2.4 35.6 1.0
O B:HOH507 2.7 55.1 1.0
CD2 B:HIS285 3.1 39.9 1.0
CD2 A:HIS285 3.1 42.5 1.0
CE1 A:HIS285 3.3 31.7 1.0
CE1 B:HIS285 3.5 34.7 1.0
O A:HOH504 3.6 42.8 1.0
CG A:HIS285 4.3 40.0 1.0
CG B:HIS285 4.3 39.9 1.0
ND1 A:HIS285 4.3 40.3 1.0
ND1 B:HIS285 4.5 41.3 1.0
O B:VAL286 4.6 34.3 1.0
OG A:SER287 4.7 43.8 1.0
CB A:SER287 4.7 26.0 1.0

Copper binding site 3 out of 3 in 6gp6

Go back to Copper Binding Sites List in 6gp6
Copper binding site 3 out of 3 in the Mamm Ctd - Copper Form


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 3 of Mamm Ctd - Copper Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu401

b:0.1
occ:1.00
NE2 B:HIS264 2.5 56.3 1.0
CE1 B:HIS264 2.9 52.5 1.0
OE1 B:GLU268 3.1 87.5 1.0
O A:HOH513 3.2 57.0 1.0
CD2 B:HIS264 3.7 51.0 1.0
ND1 B:HIS264 4.2 55.9 1.0
CD B:GLU268 4.2 81.7 1.0
CG B:HIS264 4.6 49.3 1.0
OE2 B:GLU268 4.7 83.5 1.0

Reference:

S.Barber-Zucker, R.Zarivach. Mamm Ctd - Copper Form To Be Published.
Page generated: Wed Jul 31 06:06:24 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy