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Copper in PDB 6fok: Copper Transporter Oprc

Protein crystallography data

The structure of Copper Transporter Oprc, PDB code: 6fok was solved by G.P.Riboldi, B.Van Den Berg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 84.67 / 1.97
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 156.370, 196.720, 166.350, 90.00, 90.00, 90.00
R / Rfree (%) 21 / 23.2

Copper Binding Sites:

The binding sites of Copper atom in the Copper Transporter Oprc (pdb code 6fok). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Copper Transporter Oprc, PDB code: 6fok:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 6fok

Go back to Copper Binding Sites List in 6fok
Copper binding site 1 out of 2 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Copper Transporter Oprc within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu701

b:38.0
occ:1.00
NE2 A:HIS269 2.1 32.1 1.0
SG A:CYS89 2.2 31.7 1.0
SD A:MET271 2.3 38.2 1.0
SD A:MET93 2.5 32.8 1.0
CD2 A:HIS269 3.0 29.8 1.0
CE1 A:HIS269 3.1 35.3 1.0
CG A:MET93 3.2 35.6 1.0
CB A:CYS89 3.2 30.5 1.0
CG A:MET271 3.3 37.1 1.0
CE A:MET271 3.4 42.5 1.0
CE A:MET93 3.5 36.6 1.0
CB A:MET93 3.5 36.6 1.0
CB A:MET271 3.6 32.3 1.0
CG A:HIS269 4.2 33.4 1.0
CA A:CYS89 4.2 29.6 1.0
ND1 A:HIS269 4.2 35.1 1.0
N A:MET93 4.7 30.6 1.0
CA A:MET93 4.8 34.5 1.0
CA A:MET271 4.9 31.9 1.0
CD A:PRO90 4.9 35.3 1.0

Copper binding site 2 out of 2 in 6fok

Go back to Copper Binding Sites List in 6fok
Copper binding site 2 out of 2 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Copper Transporter Oprc within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu701

b:43.8
occ:1.00
NE2 B:HIS269 2.1 34.7 1.0
SD B:MET271 2.3 42.7 1.0
SG B:CYS89 2.3 36.2 1.0
SD B:MET93 2.5 37.2 1.0
CE1 B:HIS269 3.0 33.5 1.0
CD2 B:HIS269 3.0 34.5 1.0
CE B:MET271 3.2 51.6 1.0
CB B:CYS89 3.2 36.6 1.0
CG B:MET93 3.2 39.3 1.0
CG B:MET271 3.3 39.9 1.0
CE B:MET93 3.5 38.6 1.0
CB B:MET271 3.6 37.9 1.0
CB B:MET93 3.6 38.3 1.0
ND1 B:HIS269 4.1 35.1 1.0
CG B:HIS269 4.2 36.1 1.0
CA B:CYS89 4.2 34.5 1.0
N B:MET93 4.7 38.7 1.0
CD B:PRO90 4.8 41.0 1.0
CA B:MET93 4.8 38.4 1.0
CA B:MET271 4.9 34.8 1.0
OD1 B:ASN91 5.0 55.9 1.0

Reference:

G.P.Riboldi, S.Soderholm, A.Basle, D.Bumann, B.Van Den Berg. Import of Reduced and Oxidised Ionic Copper By A Bacterial Outer Membrane Protein To Be Published.
Page generated: Sun Dec 13 11:22:23 2020

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