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Copper in PDB 6evg: Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate

Enzymatic activity of Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate

All present enzymatic activity of Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate:
1.10.3.2;

Protein crystallography data

The structure of Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate, PDB code: 6evg was solved by V.Fulop, R.Wilkinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 88.66 / 1.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.330, 48.310, 88.850, 90.00, 93.78, 90.00
R / Rfree (%) 12.5 / 14.9

Copper Binding Sites:

The binding sites of Copper atom in the Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate (pdb code 6evg). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate, PDB code: 6evg:

Copper binding site 1 out of 1 in 6evg

Go back to Copper Binding Sites List in 6evg
Copper binding site 1 out of 1 in the Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Structural and Functional Characterisation of A Bacterial Laccase-Like Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. with Oxidase Activity Towards Lignin Model Compounds and Lignosulfonate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu601

b:12.6
occ:1.00
ND1 A:HIS434 2.0 12.6 1.0
ND1 A:HIS495 2.0 12.1 1.0
SG A:CYS490 2.2 10.2 1.0
CE1 A:HIS434 2.8 12.9 1.0
CE1 A:HIS495 3.0 12.0 1.0
CG A:HIS495 3.1 10.3 1.0
CG A:HIS434 3.1 11.5 1.0
CB A:CYS490 3.2 10.3 1.0
SD A:MET500 3.3 12.7 1.0
CB A:HIS495 3.4 10.0 1.0
CB A:HIS434 3.6 11.1 1.0
CB A:VAL492 3.8 9.4 1.0
NE2 A:HIS434 4.0 13.6 1.0
CG2 A:VAL492 4.1 10.5 1.0
NE2 A:HIS495 4.1 12.8 1.0
CD2 A:HIS434 4.2 12.4 1.0
CD2 A:HIS495 4.2 11.2 1.0
CA A:HIS434 4.3 10.4 1.0
CE A:MET500 4.3 12.8 1.0
CA A:CYS490 4.6 8.9 1.0
CG1 A:VAL492 4.6 9.8 1.0
CD A:PRO435 4.7 9.3 1.0
N A:VAL492 4.7 8.1 1.0
CD2 A:PHE337 4.7 13.7 1.0
CG A:MET500 4.8 11.5 1.0
CA A:VAL492 4.9 8.6 1.0
CA A:HIS495 4.9 9.5 1.0
O A:VAL492 5.0 9.3 1.0

Reference:

R.S.Granja-Travez, R.C.Wilkinson, G.F.Persinoti, F.M.Squina, V.Fulop, T.D.H.Bugg. Structural and Functional Characterisation of Multi-Copper Oxidase Cueo From Lignin-Degrading Bacterium Ochrobactrum Sp. Reveal Its Activity Towards Lignin Model Compounds and Lignosulfonate. Febs J. V. 285 1684 2018.
ISSN: ISSN 1742-4658
PubMed: 29575798
DOI: 10.1111/FEBS.14437
Page generated: Sun Dec 13 11:22:16 2020

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