Chemical elements
  Copper
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    Chemical Properties
    Cuprous Compounds
    Complex Copper Compounds
    Cupric Compounds
    PDB 1a2v-1bxu
    PDB 1bxv-1fwx
    PDB 1g3d-1j9t
    PDB 1jcv-1mfm
    PDB 1mg2-1paz
    PDB 1pcs-1sii
    PDB 1sjm-1w6w
    PDB 1w77-2afn
    PDB 2ahk-2dv6
    PDB 2dws-2ggp
    PDB 2ghz-2mta
    PDB 2nrd-2vm3
    PDB 2vm4-2yah
    PDB 2yam-3bkt
    PDB 3bqv-3fyi
    PDB 3g5w-3mie
    PDB 3mif-3t6v
    PDB 3t6w-9pcy
      3t6w
      3t6x
      3t6z
      3t71
      3tu6
      3uaa
      3uab
      3uac
      3uad
      3uae
      4a2f
      4a2g
      4ako
      4akp
      4akq
      4azu
      4d87
      4eir
      4eis
      4esl
      4ev3
      4f05
      4fa7
      4fea
      4fwy
      4paz
      4pcy
      5azu
      5paz
      5pcy
      6paz
      6pcy
      7icj
      7paz
      7pcy
      8paz
      9pcy

Copper in the structure of Crystal Structure Analyses of Reduced (Cui) Poplar Plastocyanin At Six pH Values (pdb 5pcy)






The binding sites of Copper atom in the structure of Crystal Structure Analyses of Reduced (Cui) Poplar Plastocyanin At Six pH Values (pdb code 5pcy). This binding sites where shown with 5.0 Angstroms radius around Copper atom.
The 5pcy structure was solved by J.M.GUSS, H.C.FREEMAN, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)1.8
Space groupP212121
a (A)29.580
b (A)46.560
c (A)58.540
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)n/a
Rfree (%)n/a


Copper Binding Sites:

Copper binding site 1 out of 1 in 5pcy


Copper binding site 1 out of 1 in 5pcy
Click to enlarge
stereopicture of Copper binding site 1 out of 1 in 5pcy
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Copper in the PDB 5pcy. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Copper atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Pro36, A: His37, A: Asn38, A: Cys84, A: Pro86, A: His87, A: Met92,

conact list:


AtomAtomDistance (A)
CuO A:Pro364.00
CuC A:Pro364.78
CuNE2 A:His374.11
CuN A:His374.74
CuCB A:His373.58
CuND1 A:His372.13
CuCD2 A:His374.19
CuC A:His374.69
CuCE1 A:His372.97
CuCG A:His373.09
CuCA A:His373.71
CuN A:Asn384.50
CuCB A:Cys843.09
CuSG A:Cys842.17
CuCA A:Cys844.52
CuCG A:Pro864.59
CuNE2 A:His874.44
CuN A:His874.59
CuCB A:His873.56
CuND1 A:His872.39
CuCD2 A:His874.44
CuCE1 A:His873.36
CuCG A:His873.28
CuCA A:His874.69
CuCB A:Met924.62
CuCE A:Met923.56
CuCG A:Met924.33
CuSD A:Met922.87

interactive model:




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