Copper in PDB 5nfm: Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper.

The structure of Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper., PDB code: 5nfm was solved by T.Roret, C.Didierjean, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.43 / 0.80
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	30.752, 32.159, 62.575, 90.00, 90.00, 90.00
R / Rfree (%)	12.2 / 13.2

The binding sites of Copper atom in the Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper. (pdb code 5nfm). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper., PDB code: 5nfm:

Copper binding site 1 out of 1 in the Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper.


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu102 b:4.1 occ:1.00 NE2 A:HIS32 2.0 2.9 1.0 O A:HOH204 2.0 8.4 1.0 NE2 A:HIS67 2.0 3.7 1.0 O A:HOH289 2.0 10.3 1.0 O A:HOH210 2.4 8.1 1.0 O A:HOH295 2.4 10.1 1.0 CE1 A:HIS32 2.9 3.5 1.0 CD2 A:HIS67 3.0 3.4 1.0 CE1 A:HIS67 3.0 4.5 1.0 CD2 A:HIS32 3.1 2.8 1.0 HE1 A:HIS32 3.1 1.6 0.6 HD2 A:HIS67 3.2 1.2 0.8 HE1 A:HIS67 3.2 7.3 1.0 HD2 A:HIS32 3.3 7.6 1.0 HB2 A:ALA68 3.9 1.6 0.8 OD2 A:ASP31 4.0 7.6 1.0 ND1 A:HIS32 4.1 3.2 1.0 ND1 A:HIS67 4.1 4.4 1.0 CG A:HIS67 4.2 3.1 1.0 CG A:HIS32 4.2 2.7 1.0 OD1 A:ASP31 4.2 7.9 1.0 CG A:ASP31 4.4 5.4 1.0 O A:HOH313 4.7 17.7 1.0 CB A:ALA68 4.8 3.2 1.0 HD1 A:HIS32 4.8 16.2 0.0 HA A:ALA68 4.9 2.3 1.0 HD1 A:HIS67 4.9 4.2 0.6 HB1 A:ALA68 5.0 6.4 1.0

T.Roret, C.Didierjean. Crystal Structure of Yrba From Sinorhizobium Meliloti in Complex with Copper. To Be Published.