Copper in PDB 5c92: Novel Fungal Alcohol Oxidase with Catalytic Diversity Among the AA5 Family, in Complex with Copper

The structure of Novel Fungal Alcohol Oxidase with Catalytic Diversity Among the AA5 Family, in Complex with Copper, PDB code: 5c92 was solved by S.Urresti, D.T.Yin, M.Lafond, F.Derikvand, G.J.Berrin, B.Henrissat, P.H.Walton, H.Brumer, G.J.Davies, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	72.12 / 2.10
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	81.580, 81.580, 154.250, 90.00, 90.00, 90.00
R / Rfree (%)	14.2 / 20.1

The binding sites of Copper atom in the Novel Fungal Alcohol Oxidase with Catalytic Diversity Among the AA5 Family, in Complex with Copper (pdb code 5c92). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Novel Fungal Alcohol Oxidase with Catalytic Diversity Among the AA5 Family, in Complex with Copper, PDB code: 5c92:

Copper binding site 1 out of 1 in the Novel Fungal Alcohol Oxidase with Catalytic Diversity Among the AA5 Family, in Complex with Copper


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Novel Fungal Alcohol Oxidase with Catalytic Diversity Among the AA5 Family, in Complex with Copper within 5.0Å range: probe atom residue distance (Å) B Occ A:Cu503 b:43.2 occ:0.75 OH A:TYR120 2.1 27.9 1.0 NE2 A:HIS423 2.1 28.8 1.0 NE2 A:HIS335 2.2 27.7 1.0 OH A:TYR334 2.8 28.8 1.0 CZ A:TYR120 3.0 28.6 1.0 CD2 A:HIS423 3.0 25.9 1.0 CD2 A:HIS335 3.2 23.7 1.0 CE1 A:HIS335 3.2 24.1 1.0 CE1 A:HIS423 3.2 29.3 1.0 SG A:CYS73 3.3 28.6 1.0 CZ A:TYR334 3.3 23.7 1.0 CZ A:PHE72 3.4 26.0 1.0 CE2 A:TYR334 3.5 25.7 1.0 CE1 A:TYR120 3.5 26.2 1.0 CE1 A:PHE72 4.0 26.7 1.0 CE2 A:TYR120 4.0 27.2 1.0 CE2 A:PHE72 4.2 24.2 1.0 CG A:HIS423 4.2 25.1 1.0 ND1 A:HIS423 4.3 30.0 1.0 ND1 A:HIS335 4.3 26.4 1.0 CG A:HIS335 4.3 20.3 1.0 CE1 A:TYR334 4.3 24.2 1.0 CD2 A:TYR334 4.6 25.3 1.0 CD1 A:TYR120 4.8 24.6 1.0 OH A:TYR245 5.0 25.4 1.0 CB A:CYS73 5.0 26.9 1.0

D.T.Yin, S.Urresti, M.Lafond, E.M.Johnston, F.Derikvand, L.Ciano, J.G.Berrin, B.Henrissat, P.H.Walton, G.J.Davies, H.Brumer. Structure-Function Characterization Reveals New Catalytic Diversity in the Galactose Oxidase and Glyoxal Oxidase Family. Nat Commun V. 6 10197 2015.
ISSN: ESSN 2041-1723
PubMed: 26680532
DOI: 10.1038/NCOMMS10197