Copper in PDB 4oua: Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
Enzymatic activity of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
All present enzymatic activity of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI):
1.14.18.1;
Protein crystallography data
The structure of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI), PDB code: 4oua
was solved by
St.G.Mauracher,
C.Molitor,
R.Al-Oweini,
U.Kortz,
A.Rompel,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
48.13 /
2.76
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
213.530,
83.720,
66.950,
90.00,
102.53,
90.00
|
R / Rfree (%)
|
18.6 /
22.8
|
Other elements in 4oua:
The structure of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI) also contains other interesting chemical elements:
Copper Binding Sites:
The binding sites of Copper atom in the Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
(pdb code 4oua). This binding sites where shown within
5.0 Angstroms radius around Copper atom.
In total 5 binding sites of Copper where determined in the
Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI), PDB code: 4oua:
Jump to Copper binding site number:
1;
2;
3;
4;
5;
Copper binding site 1 out
of 5 in 4oua
Go back to
Copper Binding Sites List in 4oua
Copper binding site 1 out
of 5 in the Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 1 of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cu401
b:44.3
occ:1.00
|
NE2
|
A:HIS57
|
2.1
|
34.7
|
1.0
|
NE2
|
A:HIS91
|
2.1
|
35.4
|
1.0
|
NE2
|
A:HIS82
|
2.1
|
43.8
|
1.0
|
O
|
A:HOH549
|
2.4
|
42.6
|
0.9
|
CD2
|
A:HIS57
|
2.9
|
39.3
|
1.0
|
CE1
|
A:HIS91
|
3.0
|
36.9
|
1.0
|
CE1
|
A:HIS82
|
3.1
|
49.3
|
1.0
|
CD2
|
A:HIS82
|
3.1
|
39.6
|
1.0
|
CE1
|
A:HIS57
|
3.1
|
38.6
|
1.0
|
CD2
|
A:HIS91
|
3.1
|
32.6
|
1.0
|
CB
|
A:CYS80
|
3.3
|
40.2
|
1.0
|
SG
|
A:CYS80
|
3.8
|
48.1
|
1.0
|
CG
|
A:HIS57
|
4.1
|
43.4
|
1.0
|
ND1
|
A:HIS57
|
4.1
|
40.3
|
1.0
|
ND1
|
A:HIS91
|
4.2
|
32.3
|
1.0
|
ND1
|
A:HIS82
|
4.2
|
42.2
|
1.0
|
CU
|
A:CU1402
|
4.2
|
30.6
|
0.9
|
CG
|
A:HIS82
|
4.2
|
40.9
|
1.0
|
CG
|
A:HIS91
|
4.2
|
34.4
|
1.0
|
CE1
|
A:HIS283
|
4.3
|
28.1
|
1.0
|
CZ3
|
A:TRP90
|
4.4
|
34.7
|
1.0
|
CE1
|
A:PHE87
|
4.5
|
29.7
|
1.0
|
CA
|
A:CYS80
|
4.6
|
39.0
|
1.0
|
CZ
|
A:PHE279
|
4.6
|
36.2
|
1.0
|
NE2
|
A:HIS283
|
4.7
|
28.6
|
1.0
|
CE1
|
A:PHE279
|
4.9
|
36.5
|
1.0
|
CE3
|
A:TRP90
|
5.0
|
37.4
|
1.0
|
|
Copper binding site 2 out
of 5 in 4oua
Go back to
Copper Binding Sites List in 4oua
Copper binding site 2 out
of 5 in the Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 2 of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cu402
b:30.6
occ:0.92
|
CU
|
A:CU1402
|
0.0
|
30.6
|
0.9
|
NE2
|
A:HIS283
|
2.0
|
28.6
|
1.0
|
NE2
|
A:HIS251
|
2.0
|
35.0
|
1.0
|
NE2
|
A:HIS255
|
2.0
|
35.9
|
1.0
|
CU
|
A:CU1402
|
2.3
|
29.3
|
0.1
|
O
|
A:HOH549
|
2.3
|
42.6
|
0.9
|
CE1
|
A:HIS283
|
2.5
|
28.1
|
1.0
|
CE1
|
A:HIS251
|
2.6
|
31.6
|
1.0
|
CD2
|
A:HIS255
|
2.9
|
38.7
|
1.0
|
CE1
|
A:HIS255
|
2.9
|
36.1
|
1.0
|
CD2
|
A:HIS251
|
3.2
|
33.2
|
1.0
|
CD2
|
A:HIS283
|
3.2
|
36.2
|
1.0
|
CE1
|
A:PHE279
|
3.7
|
36.5
|
1.0
|
ND1
|
A:HIS283
|
3.8
|
24.9
|
1.0
|
ND1
|
A:HIS251
|
3.9
|
29.3
|
1.0
|
ND1
|
A:HIS255
|
4.0
|
35.7
|
1.0
|
CG
|
A:HIS255
|
4.0
|
37.3
|
1.0
|
CG
|
A:HIS283
|
4.2
|
27.3
|
1.0
|
CG
|
A:HIS251
|
4.2
|
28.8
|
1.0
|
CU
|
A:CU1401
|
4.2
|
44.3
|
1.0
|
CZ
|
A:PHE279
|
4.4
|
36.2
|
1.0
|
ND1
|
A:HIS282
|
4.4
|
29.4
|
1.0
|
CD1
|
A:PHE279
|
4.5
|
37.9
|
1.0
|
CE1
|
A:HIS282
|
4.5
|
23.2
|
1.0
|
NE2
|
A:HIS57
|
4.6
|
34.7
|
1.0
|
NE2
|
A:HIS91
|
4.9
|
35.4
|
1.0
|
CE1
|
A:HIS57
|
5.0
|
38.6
|
1.0
|
|
Copper binding site 3 out
of 5 in 4oua
Go back to
Copper Binding Sites List in 4oua
Copper binding site 3 out
of 5 in the Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 3 of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cu402
b:29.3
occ:0.08
|
CU
|
A:CU1402
|
0.0
|
29.3
|
0.1
|
NE2
|
A:HIS255
|
2.1
|
35.9
|
1.0
|
NE2
|
A:HIS251
|
2.1
|
35.0
|
1.0
|
NE2
|
A:HIS283
|
2.1
|
28.6
|
1.0
|
ND1
|
A:HIS282
|
2.2
|
29.4
|
1.0
|
CU
|
A:CU1402
|
2.3
|
30.6
|
0.9
|
CE1
|
A:HIS282
|
2.4
|
23.2
|
1.0
|
CD2
|
A:HIS251
|
2.4
|
33.2
|
1.0
|
CD2
|
A:HIS283
|
2.7
|
36.2
|
1.0
|
CD2
|
A:HIS255
|
2.8
|
38.7
|
1.0
|
CE1
|
A:HIS283
|
3.0
|
28.1
|
1.0
|
CE1
|
A:HIS255
|
3.0
|
36.1
|
1.0
|
CE1
|
A:HIS251
|
3.4
|
31.6
|
1.0
|
CG
|
A:HIS282
|
3.4
|
27.8
|
1.0
|
NE2
|
A:HIS282
|
3.5
|
24.4
|
1.0
|
CG
|
A:HIS251
|
3.7
|
28.8
|
1.0
|
CG
|
A:HIS283
|
3.7
|
27.3
|
1.0
|
ND1
|
A:HIS283
|
3.8
|
24.9
|
1.0
|
CG
|
A:HIS255
|
3.9
|
37.3
|
1.0
|
ND1
|
A:HIS255
|
4.0
|
35.7
|
1.0
|
CD2
|
A:HIS282
|
4.0
|
22.8
|
1.0
|
ND1
|
A:HIS251
|
4.1
|
29.3
|
1.0
|
O
|
A:HIS251
|
4.1
|
37.3
|
1.0
|
CB
|
A:HIS282
|
4.3
|
32.8
|
1.0
|
O
|
A:HOH549
|
4.5
|
42.6
|
0.9
|
CE1
|
A:PHE279
|
4.6
|
36.5
|
1.0
|
CG2
|
A:VAL286
|
4.7
|
25.8
|
1.0
|
CD1
|
A:PHE279
|
4.8
|
37.9
|
1.0
|
CB
|
A:HIS251
|
4.9
|
26.9
|
1.0
|
N
|
A:HIS283
|
4.9
|
26.6
|
1.0
|
CB
|
A:HIS283
|
4.9
|
26.6
|
1.0
|
C
|
A:HIS251
|
4.9
|
33.7
|
1.0
|
|
Copper binding site 4 out
of 5 in 4oua
Go back to
Copper Binding Sites List in 4oua
Copper binding site 4 out
of 5 in the Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 4 of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cu601
b:43.4
occ:1.00
|
NE2
|
B:HIS57
|
2.0
|
38.2
|
1.0
|
NE2
|
B:HIS91
|
2.0
|
37.4
|
1.0
|
NE2
|
B:HIS82
|
2.0
|
46.6
|
1.0
|
O
|
B:HOH780
|
2.3
|
32.9
|
0.9
|
CD2
|
B:HIS57
|
2.9
|
37.5
|
1.0
|
CE1
|
B:HIS82
|
2.9
|
46.2
|
1.0
|
CE1
|
B:HIS91
|
2.9
|
36.2
|
1.0
|
CD2
|
B:HIS82
|
3.1
|
42.7
|
1.0
|
CE1
|
B:HIS57
|
3.1
|
34.9
|
1.0
|
CD2
|
B:HIS91
|
3.1
|
34.9
|
1.0
|
CB
|
B:CYS80
|
3.2
|
32.0
|
1.0
|
SG
|
B:CYS80
|
3.6
|
48.9
|
1.0
|
ND1
|
B:HIS82
|
4.0
|
42.4
|
1.0
|
CG
|
B:HIS57
|
4.0
|
31.6
|
1.0
|
ND1
|
B:HIS91
|
4.1
|
32.6
|
1.0
|
ND1
|
B:HIS57
|
4.1
|
36.0
|
1.0
|
CG
|
B:HIS82
|
4.1
|
43.3
|
1.0
|
CG
|
B:HIS91
|
4.2
|
30.7
|
1.0
|
CZ3
|
B:TRP90
|
4.4
|
27.3
|
1.0
|
CA
|
B:CYS80
|
4.5
|
32.5
|
1.0
|
CE1
|
B:HIS283
|
4.6
|
27.1
|
1.0
|
CU
|
B:CU1602
|
4.7
|
37.0
|
1.0
|
CE1
|
B:PHE87
|
4.8
|
34.8
|
1.0
|
NE2
|
B:HIS283
|
4.8
|
36.9
|
1.0
|
CZ
|
B:PHE279
|
4.9
|
30.9
|
1.0
|
C
|
B:CYS80
|
4.9
|
33.3
|
1.0
|
CE3
|
B:TRP90
|
4.9
|
24.6
|
1.0
|
N
|
B:THR81
|
4.9
|
33.8
|
1.0
|
|
Copper binding site 5 out
of 5 in 4oua
Go back to
Copper Binding Sites List in 4oua
Copper binding site 5 out
of 5 in the Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI)
Mono view
Stereo pair view
|
A full contact list of Copper with other atoms in the Cu binding
site number 5 of Coexistent Single-Crystal Structure of Latent and Active Mushroom Tyrosinase (ABPPO4) Mediated By A Hexatungstotellurate(VI) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cu602
b:37.0
occ:1.00
|
NE2
|
B:HIS255
|
1.9
|
30.9
|
1.0
|
NE2
|
B:HIS283
|
2.0
|
36.9
|
1.0
|
NE2
|
B:HIS251
|
2.0
|
33.6
|
1.0
|
O
|
B:HOH780
|
2.3
|
32.9
|
0.9
|
CE1
|
B:HIS283
|
2.5
|
27.1
|
1.0
|
CE1
|
B:HIS255
|
2.6
|
36.1
|
1.0
|
CE1
|
B:HIS251
|
2.9
|
34.6
|
1.0
|
CD2
|
B:HIS255
|
3.1
|
37.6
|
1.0
|
CD2
|
B:HIS251
|
3.1
|
30.2
|
1.0
|
CD2
|
B:HIS283
|
3.2
|
30.3
|
1.0
|
CE2
|
B:PHE279
|
3.7
|
32.8
|
1.0
|
ND1
|
B:HIS283
|
3.7
|
24.4
|
1.0
|
ND1
|
B:HIS255
|
3.8
|
38.3
|
1.0
|
CZ
|
B:PHE279
|
4.0
|
30.9
|
1.0
|
CG
|
B:HIS283
|
4.0
|
26.2
|
1.0
|
ND1
|
B:HIS251
|
4.0
|
26.0
|
1.0
|
CG
|
B:HIS255
|
4.1
|
34.2
|
1.0
|
CD2
|
B:HIS282
|
4.1
|
29.9
|
1.0
|
CG
|
B:HIS251
|
4.2
|
25.3
|
1.0
|
CE2
|
B:PHE454
|
4.3
|
37.4
|
1.0
|
NE2
|
B:HIS282
|
4.4
|
29.0
|
1.0
|
CD2
|
B:PHE279
|
4.5
|
31.2
|
1.0
|
CU
|
B:CU1601
|
4.7
|
43.4
|
1.0
|
NE2
|
B:HIS57
|
4.8
|
38.2
|
1.0
|
CZ
|
B:PHE454
|
4.8
|
37.5
|
1.0
|
CD2
|
B:PHE454
|
4.9
|
37.6
|
1.0
|
|
Reference:
S.G.Mauracher,
C.Molitor,
R.Al-Oweini,
U.Kortz,
A.Rompel.
Latent and Active ABPPO4 Mushroom Tyrosinase Cocrystallized with Hexatungstotellurate(VI) in A Single Crystal. Acta Crystallogr.,Sect.D V. 70 2301 2014.
ISSN: ISSN 0907-4449
PubMed: 25195745
DOI: 10.1107/S1399004714013777
Page generated: Wed Jul 31 03:20:03 2024
|