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Copper in PDB 4n3u: Candida Albicans Superoxide Dismutase 5 (SOD5), Cu(II)

Protein crystallography data

The structure of Candida Albicans Superoxide Dismutase 5 (SOD5), Cu(II), PDB code: 4n3u was solved by A.Galaleldeen, A.B.Taylor, J.J.Waninger-Saroni, S.P.Holloway, P.J.Hart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.10 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.473, 39.953, 101.992, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 22.5

Copper Binding Sites:

The binding sites of Copper atom in the Candida Albicans Superoxide Dismutase 5 (SOD5), Cu(II) (pdb code 4n3u). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Candida Albicans Superoxide Dismutase 5 (SOD5), Cu(II), PDB code: 4n3u:

Copper binding site 1 out of 1 in 4n3u

Go back to Copper Binding Sites List in 4n3u
Copper binding site 1 out of 1 in the Candida Albicans Superoxide Dismutase 5 (SOD5), Cu(II)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Candida Albicans Superoxide Dismutase 5 (SOD5), Cu(II) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:21.6
occ:0.79
NE2 A:HIS153 2.0 14.3 1.0
ND1 A:HIS75 2.1 15.3 1.0
NE2 A:HIS77 2.1 16.8 1.0
NE2 A:HIS93 2.8 28.0 1.0
CE1 A:HIS153 2.9 20.8 1.0
CE1 A:HIS77 2.9 16.2 1.0
CD2 A:HIS153 3.0 16.5 1.0
CE1 A:HIS75 3.0 17.6 1.0
CG A:HIS75 3.1 17.4 1.0
OA2 A:FLC202 3.1 34.2 1.0
CD2 A:HIS77 3.2 14.6 1.0
CB A:HIS75 3.4 14.4 1.0
CD2 A:HIS93 3.4 22.6 1.0
OA1 A:FLC202 3.5 28.4 1.0
CAC A:FLC202 3.7 28.4 1.0
CE1 A:HIS93 3.8 25.3 1.0
ND1 A:HIS153 4.0 18.0 1.0
CG A:HIS153 4.1 16.0 1.0
ND1 A:HIS77 4.1 16.0 1.0
NE2 A:HIS75 4.1 15.9 1.0
CB A:VAL151 4.2 13.5 1.0
CD2 A:HIS75 4.2 14.1 1.0
N A:HIS75 4.2 13.2 1.0
CG A:HIS77 4.2 14.9 1.0
O A:VAL151 4.3 13.6 1.0
CA A:HIS75 4.3 13.6 1.0
CG1 A:VAL151 4.5 14.4 1.0
CG A:HIS93 4.5 27.4 1.0
O A:HIS75 4.7 14.4 1.0
ND1 A:HIS93 4.7 26.0 1.0
C A:HIS75 4.8 13.8 1.0
C A:VAL151 4.9 14.3 1.0
C A:TYR74 4.9 13.8 1.0
CG2 A:VAL151 5.0 12.8 1.0

Reference:

J.E.Gleason, A.Galaleldeen, R.L.Peterson, A.B.Taylor, S.P.Holloway, J.Waninger-Saroni, B.P.Cormack, D.E.Cabelli, P.J.Hart, V.C.Culotta. Candida Albicans SOD5 Represents the Prototype of An Unprecedented Class of Cu-Only Superoxide Dismutases Required For Pathogen Defense. Proc.Natl.Acad.Sci.Usa V. 111 5866 2014.
ISSN: ISSN 0027-8424
PubMed: 24711423
DOI: 10.1073/PNAS.1400137111
Page generated: Sun Dec 13 11:15:20 2020

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