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Copper in PDB 4ko5: Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F)

Protein crystallography data

The structure of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F), PDB code: 4ko5 was solved by K.K.Inampudi, Y.Wang, W.Meng, P.H.Tobin, C.J.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.25 / 1.79
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.920, 55.620, 83.580, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 24

Copper Binding Sites:

The binding sites of Copper atom in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F) (pdb code 4ko5). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F), PDB code: 4ko5:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 4ko5

Go back to Copper Binding Sites List in 4ko5
Copper binding site 1 out of 2 in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:13.1
occ:1.00
ND1 A:HIS46 2.0 8.0 1.0
ND1 A:HIS117 2.0 11.1 1.0
SG A:CYS112 2.2 11.0 1.0
O A:GLY45 2.7 10.9 1.0
CE1 A:HIS46 2.9 10.2 1.0
CE1 A:HIS117 3.0 11.6 1.0
CG A:HIS46 3.1 9.3 1.0
CG A:HIS117 3.1 14.9 1.0
SD A:MET121 3.2 13.9 1.0
CA A:HIS46 3.3 9.8 1.0
CB A:CYS112 3.3 10.7 1.0
CB A:HIS117 3.4 10.2 1.0
CB A:HIS46 3.5 9.1 1.0
C A:GLY45 3.6 11.2 1.0
CE A:MET121 3.8 12.9 1.0
N A:HIS46 3.8 9.6 1.0
CB A:PHE114 3.9 9.8 1.0
NE2 A:HIS46 4.1 10.1 1.0
NE2 A:HIS117 4.1 12.1 1.0
CD2 A:HIS46 4.1 9.9 1.0
CD2 A:HIS117 4.2 12.6 1.0
C A:HIS46 4.5 9.6 1.0
N A:ASN47 4.6 10.2 1.0
CA A:CYS112 4.7 9.5 1.0
CG A:MET121 4.7 14.7 1.0
CG A:PHE114 4.7 10.4 1.0
N A:PHE114 4.8 10.2 1.0
CA A:PHE114 4.9 11.3 1.0
CA A:HIS117 4.9 11.8 1.0
CA A:GLY45 5.0 8.7 1.0

Copper binding site 2 out of 2 in 4ko5

Go back to Copper Binding Sites List in 4ko5
Copper binding site 2 out of 2 in the Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F)


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:12.6
occ:1.00
ND1 B:HIS117 2.0 9.7 1.0
ND1 B:HIS46 2.1 7.3 1.0
SG B:CYS112 2.3 20.0 1.0
CE1 B:HIS117 2.9 10.3 1.0
O B:GLY45 3.0 11.7 1.0
CE1 B:HIS46 3.0 9.5 1.0
CG B:HIS117 3.1 9.9 1.0
CG B:HIS46 3.1 8.3 1.0
SD B:MET121 3.1 11.2 1.0
CB B:CYS112 3.3 20.0 1.0
CA B:HIS46 3.4 9.7 1.0
CB B:HIS117 3.4 13.1 1.0
CB B:HIS46 3.5 9.2 1.0
CE B:MET121 3.8 9.7 1.0
C B:GLY45 3.9 11.2 1.0
CB B:PHE114 3.9 10.8 1.0
N B:HIS46 4.1 10.2 1.0
NE2 B:HIS117 4.1 8.0 1.0
NE2 B:HIS46 4.1 10.0 1.0
CD2 B:HIS117 4.1 11.7 1.0
CD2 B:HIS46 4.2 8.7 1.0
C B:HIS46 4.5 9.6 1.0
N B:ASN47 4.6 11.0 1.0
CG B:PHE114 4.6 12.0 1.0
CG B:MET121 4.7 11.2 1.0
CA B:CYS112 4.7 10.4 1.0
N B:PHE114 4.9 9.9 1.0
CA B:HIS117 4.9 11.1 1.0
CA B:PHE114 5.0 10.7 1.0
CB B:MET121 5.0 11.0 1.0

Reference:

K.K.Inampudi, Y.Wang, W.Meng, P.H.Tobin, C.J.Wilson. Investigating the Functional Significance of the Interlocked Pair Structural Determinants in Pseudomonas Aeruginosa Azurin (V31I/W48L/V95I/Y108F) To Be Published.
Page generated: Wed Jul 31 03:08:47 2024

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