Atomistry » Copper » PDB 4e9v-4hhg » 4hcf
Atomistry »
  Copper »
    PDB 4e9v-4hhg »
      4hcf »

Copper in PDB 4hcf: Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis

Protein crystallography data

The structure of Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis, PDB code: 4hcf was solved by Y.Kim, N.Maltseva, S.Shatsman, W.F.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.43 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 38.275, 73.594, 40.366, 90.00, 116.72, 90.00
R / Rfree (%) 17.7 / 21

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis (pdb code 4hcf). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis, PDB code: 4hcf:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 4hcf

Go back to Copper Binding Sites List in 4hcf
Copper binding site 1 out of 2 in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:18.2
occ:1.00
ND1 A:HIS78 2.1 17.5 1.0
ND1 A:HIS116 2.1 17.8 1.0
SG A:CYS113 2.2 16.0 1.0
SE A:MSE121 2.6 16.2 0.8
CE1 A:HIS78 3.0 14.8 1.0
CE1 A:HIS116 3.1 18.8 1.0
CG A:HIS78 3.1 17.2 1.0
CG A:HIS116 3.2 18.2 1.0
CB A:CYS113 3.2 13.2 1.0
CB A:HIS116 3.5 18.1 1.0
CB A:HIS78 3.5 16.0 1.0
CE A:MSE121 3.6 18.7 1.0
CA A:HIS78 3.7 16.8 1.0
N A:HIS116 4.0 17.0 1.0
CG A:MSE121 4.0 9.6 1.0
O A:GLU77 4.1 18.5 1.0
NE2 A:HIS78 4.2 15.1 1.0
NE2 A:HIS116 4.2 20.3 1.0
CD2 A:HIS78 4.2 16.8 1.0
CD2 A:HIS116 4.3 18.4 1.0
CA A:HIS116 4.3 17.8 1.0
CB A:TYR115 4.4 20.0 1.0
N A:THR79 4.4 16.1 1.0
CB A:MSE121 4.5 12.8 1.0
C A:HIS78 4.6 17.8 1.0
CA A:CYS113 4.6 12.6 1.0
N A:HIS78 4.7 16.8 1.0
C A:TYR115 4.8 21.1 1.0
OD2 A:ASP51 4.8 21.0 1.0
C A:GLU77 4.8 16.7 1.0
N A:TYR115 4.9 16.6 1.0
CA A:TYR115 4.9 18.0 1.0

Copper binding site 2 out of 2 in 4hcf

Go back to Copper Binding Sites List in 4hcf
Copper binding site 2 out of 2 in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:17.3
occ:1.00
ND1 B:HIS78 2.1 17.3 1.0
SG B:CYS113 2.2 14.8 1.0
ND1 B:HIS116 2.2 21.6 1.0
SE B:MSE121 2.7 19.5 0.8
CE1 B:HIS78 2.9 14.6 1.0
CG B:HIS78 3.1 15.5 1.0
CE1 B:HIS116 3.1 22.0 1.0
CB B:CYS113 3.2 12.7 1.0
CG B:HIS116 3.2 18.9 1.0
CE B:MSE121 3.5 16.9 1.0
CB B:HIS116 3.5 15.8 1.0
CB B:HIS78 3.5 14.7 1.0
CA B:HIS78 3.7 14.7 1.0
N B:HIS116 4.0 18.8 1.0
NE2 B:HIS78 4.1 15.2 1.0
O B:GLU77 4.1 17.7 1.0
CG B:MSE121 4.1 11.9 1.0
CD2 B:HIS78 4.2 13.2 1.0
NE2 B:HIS116 4.3 22.8 1.0
N B:THR79 4.3 14.1 1.0
CD2 B:HIS116 4.3 18.5 1.0
CA B:HIS116 4.4 17.9 1.0
CB B:TYR115 4.4 19.7 1.0
C B:HIS78 4.6 13.3 1.0
CB B:MSE121 4.6 13.9 1.0
CA B:CYS113 4.6 13.5 1.0
N B:HIS78 4.8 16.6 1.0
OD1 B:ASP51 4.8 21.7 1.0
C B:TYR115 4.8 18.6 1.0
C B:GLU77 4.8 18.8 1.0
CD2 B:TYR115 4.9 20.3 1.0
N B:TYR115 5.0 14.2 1.0

Reference:

Y.Kim, N.Maltseva, S.Shatsman, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis To Be Published.
Page generated: Sun Dec 13 11:14:38 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy