Atomistry » Copper » PDB 4e9v-4hhg » 4hcf
Atomistry »
  Copper »
    PDB 4e9v-4hhg »
      4hcf »

Copper in PDB 4hcf: Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis

Protein crystallography data

The structure of Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis, PDB code: 4hcf was solved by Y.Kim, N.Maltseva, S.Shatsman, W.F.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.43 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 38.275, 73.594, 40.366, 90.00, 116.72, 90.00
R / Rfree (%) 17.7 / 21

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis (pdb code 4hcf). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis, PDB code: 4hcf:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 4hcf

Go back to Copper Binding Sites List in 4hcf
Copper binding site 1 out of 2 in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu201

b:18.2
occ:1.00
ND1 A:HIS78 2.1 17.5 1.0
ND1 A:HIS116 2.1 17.8 1.0
SG A:CYS113 2.2 16.0 1.0
SE A:MSE121 2.6 16.2 0.8
CE1 A:HIS78 3.0 14.8 1.0
CE1 A:HIS116 3.1 18.8 1.0
CG A:HIS78 3.1 17.2 1.0
CG A:HIS116 3.2 18.2 1.0
CB A:CYS113 3.2 13.2 1.0
CB A:HIS116 3.5 18.1 1.0
CB A:HIS78 3.5 16.0 1.0
CE A:MSE121 3.6 18.7 1.0
CA A:HIS78 3.7 16.8 1.0
N A:HIS116 4.0 17.0 1.0
CG A:MSE121 4.0 9.6 1.0
O A:GLU77 4.1 18.5 1.0
NE2 A:HIS78 4.2 15.1 1.0
NE2 A:HIS116 4.2 20.3 1.0
CD2 A:HIS78 4.2 16.8 1.0
CD2 A:HIS116 4.3 18.4 1.0
CA A:HIS116 4.3 17.8 1.0
CB A:TYR115 4.4 20.0 1.0
N A:THR79 4.4 16.1 1.0
CB A:MSE121 4.5 12.8 1.0
C A:HIS78 4.6 17.8 1.0
CA A:CYS113 4.6 12.6 1.0
N A:HIS78 4.7 16.8 1.0
C A:TYR115 4.8 21.1 1.0
OD2 A:ASP51 4.8 21.0 1.0
C A:GLU77 4.8 16.7 1.0
N A:TYR115 4.9 16.6 1.0
CA A:TYR115 4.9 18.0 1.0

Copper binding site 2 out of 2 in 4hcf

Go back to Copper Binding Sites List in 4hcf
Copper binding site 2 out of 2 in the Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu201

b:17.3
occ:1.00
ND1 B:HIS78 2.1 17.3 1.0
SG B:CYS113 2.2 14.8 1.0
ND1 B:HIS116 2.2 21.6 1.0
SE B:MSE121 2.7 19.5 0.8
CE1 B:HIS78 2.9 14.6 1.0
CG B:HIS78 3.1 15.5 1.0
CE1 B:HIS116 3.1 22.0 1.0
CB B:CYS113 3.2 12.7 1.0
CG B:HIS116 3.2 18.9 1.0
CE B:MSE121 3.5 16.9 1.0
CB B:HIS116 3.5 15.8 1.0
CB B:HIS78 3.5 14.7 1.0
CA B:HIS78 3.7 14.7 1.0
N B:HIS116 4.0 18.8 1.0
NE2 B:HIS78 4.1 15.2 1.0
O B:GLU77 4.1 17.7 1.0
CG B:MSE121 4.1 11.9 1.0
CD2 B:HIS78 4.2 13.2 1.0
NE2 B:HIS116 4.3 22.8 1.0
N B:THR79 4.3 14.1 1.0
CD2 B:HIS116 4.3 18.5 1.0
CA B:HIS116 4.4 17.9 1.0
CB B:TYR115 4.4 19.7 1.0
C B:HIS78 4.6 13.3 1.0
CB B:MSE121 4.6 13.9 1.0
CA B:CYS113 4.6 13.5 1.0
N B:HIS78 4.8 16.6 1.0
OD1 B:ASP51 4.8 21.7 1.0
C B:TYR115 4.8 18.6 1.0
C B:GLU77 4.8 18.8 1.0
CD2 B:TYR115 4.9 20.3 1.0
N B:TYR115 5.0 14.2 1.0

Reference:

Y.Kim, N.Maltseva, S.Shatsman, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Uncharacterized Cupredoxin-Like Domain Protein CUPREDOXIN_1 with Copper Bound From Bacillus Anthracis To Be Published.
Page generated: Wed Jul 31 03:01:24 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy