Atomistry » Copper » PDB 4b61-4e9t » 4bte
Atomistry »
  Copper »
    PDB 4b61-4e9t »
      4bte »

Copper in PDB 4bte: Dj-1 Cu(I) Complex

Protein crystallography data

The structure of Dj-1 Cu(I) Complex, PDB code: 4bte was solved by M.R.A.Puno, M.Odell, P.C.E.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.64 / 1.38
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 75.257, 75.257, 75.354, 90.00, 90.00, 120.00
R / Rfree (%) 11.841 / 14.981

Copper Binding Sites:

The binding sites of Copper atom in the Dj-1 Cu(I) Complex (pdb code 4bte). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the Dj-1 Cu(I) Complex, PDB code: 4bte:

Copper binding site 1 out of 1 in 4bte

Go back to Copper Binding Sites List in 4bte
Copper binding site 1 out of 1 in the Dj-1 Cu(I) Complex


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Dj-1 Cu(I) Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu1189

b:66.6
occ:0.40
SG A:CYS53 1.9 32.7 1.0
CB A:CYS53 3.4 16.0 1.0
N A:CYS53 3.8 11.9 1.0
CA A:CYS53 3.9 12.5 1.0
CB A:PRO43 4.0 17.6 1.0
CG A:PRO43 4.1 23.2 1.0
C A:ILE52 4.3 12.6 1.0
CG1 A:VAL51 4.4 13.8 1.0
O A:VAL51 4.5 11.5 1.0
C A:VAL51 4.9 11.0 1.0
O A:ILE52 4.9 13.2 1.0
CA A:ILE52 4.9 10.5 1.0
CA A:PRO43 5.0 14.5 1.0

Reference:

M.R.Puno, N.A.Patel, S.G.Moller, C.V.Robinson, P.C.E.Moody, M.Odell. Structure of Cu(I)-Bound Dj-1 Reveals A Biscysteinate Metal Binding Site at the Homodimer Interface: Insights Into Mutational Inactivation of Dj-1 in Parkinsonism. J.Am.Chem.Soc. V. 135 15974 2013.
ISSN: ISSN 0002-7863
PubMed: 24144264
DOI: 10.1021/JA406010M
Page generated: Wed Jul 31 02:39:20 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy