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Copper in PDB 4alc: X-Ray Photoreduction of Polysaccharide Monooxigenase CBM33

Protein crystallography data

The structure of X-Ray Photoreduction of Polysaccharide Monooxigenase CBM33, PDB code: 4alc was solved by M.Gudmundsson, M.Wu, T.Ishida, M.H.Momeni, G.Vaaje-Kolstad, V.Eijsink, M.Sandgren, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.60 / 1.49
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.418, 48.556, 68.447, 90.00, 90.00, 90.00
R / Rfree (%) 16.1 / 18.8

Copper Binding Sites:

The binding sites of Copper atom in the X-Ray Photoreduction of Polysaccharide Monooxigenase CBM33 (pdb code 4alc). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total only one binding site of Copper was determined in the X-Ray Photoreduction of Polysaccharide Monooxigenase CBM33, PDB code: 4alc:

Copper binding site 1 out of 1 in 4alc

Go back to Copper Binding Sites List in 4alc
Copper binding site 1 out of 1 in the X-Ray Photoreduction of Polysaccharide Monooxigenase CBM33


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of X-Ray Photoreduction of Polysaccharide Monooxigenase CBM33 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu195

b:7.3
occ:1.00
NE2 A:HIS114 2.0 7.7 1.0
ND1 A:HIS29 2.0 6.3 1.0
N A:HIS29 2.1 6.1 1.0
O A:HOH2001 2.2 16.2 1.0
O A:HOH2002 2.2 15.4 1.0
CD2 A:HIS114 2.9 8.2 1.0
CG A:HIS29 3.0 6.2 1.0
CE1 A:HIS114 3.0 8.2 1.0
CE1 A:HIS29 3.0 6.3 1.0
CA A:HIS29 3.2 6.2 1.0
CB A:HIS29 3.3 6.3 1.0
CZ A:PHE185 3.5 6.2 1.0
CB A:ALA112 3.9 7.9 1.0
CE1 A:PHE185 4.1 6.0 1.0
ND1 A:HIS114 4.1 8.2 1.0
CG A:HIS114 4.1 8.3 1.0
NE2 A:HIS29 4.1 6.4 1.0
O A:ALA112 4.1 8.7 1.0
CD2 A:HIS29 4.1 6.3 1.0
CE2 A:PHE185 4.3 6.1 1.0
O A:HOH2185 4.3 12.3 1.0
C A:HIS29 4.4 6.3 1.0
O A:HOH2093 4.5 18.2 1.0
O A:HOH2016 4.7 20.3 1.0
O A:HIS29 4.8 6.4 1.0
C A:ALA112 4.9 8.4 1.0
CA A:ALA112 4.9 7.9 1.0

Reference:

M.Gudmundsson, S.Kim, M.Wu, T.Ishida, M.Haddad Momeni, G.Vaaje-Kolstad, D.Lundberg, A.Royant, J.Stahlberg, V.G.Eijsink, G.T.Beckham, M.Sandgren. Structural and Electronic Snapshots During the Transition From A Cu(II) to Cu(I) Metal Center of A Lytic Polysaccharide Monooxygenase By X-Ray Photo-Reduction. J.Biol.Chem. V. 289 18782 2014.
ISSN: ISSN 0021-9258
PubMed: 24828494
DOI: 10.1074/JBC.M114.563494
Page generated: Sun Dec 13 11:13:22 2020

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