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Copper in PDB 3t51: Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex

Protein crystallography data

The structure of Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex, PDB code: 3t51 was solved by C.-C.Su, F.Long, E.W.Yu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 3.90
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 159.639, 159.639, 679.826, 90.00, 90.00, 120.00
R / Rfree (%) 25.9 / 32.5

Copper Binding Sites:

The binding sites of Copper atom in the Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex (pdb code 3t51). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex, PDB code: 3t51:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 3t51

Go back to Copper Binding Sites List in 3t51
Copper binding site 1 out of 2 in the Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu1048

b:0.0
occ:1.00
CE A:MET573 2.7 0.1 1.0
SD A:MET573 2.8 0.2 1.0
SD A:MET672 3.0 0.3 1.0
OE2 A:GLU625 3.1 0.8 1.0
SD A:MET623 3.8 0.9 1.0
CE A:MET672 4.1 0.4 1.0
CG A:MET573 4.2 0.5 1.0
CD A:GLU625 4.3 1.0 1.0
OD1 A:ASN668 4.6 0.7 1.0
CG A:MET672 4.7 0.6 1.0
ND2 A:ASN668 4.7 0.8 1.0
CB A:GLU625 4.8 0.4 1.0
CG A:MET623 4.9 1.0 1.0

Copper binding site 2 out of 2 in 3t51

Go back to Copper Binding Sites List in 3t51
Copper binding site 2 out of 2 in the Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Crystal Structures of the Pre-Extrusion and Extrusion States of the Cusba Adaptor-Transporter Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu1049

b:0.8
occ:1.00
CD1 A:TRP138 2.8 0.7 1.0
NH1 A:ARG669 3.1 0.8 1.0
OD2 A:ASP617 3.5 0.2 1.0
NE1 A:TRP138 3.8 0.9 1.0
CG A:TRP138 3.8 0.9 1.0
OD1 A:ASP617 3.8 1.0 1.0
CG A:ASP617 4.0 0.0 1.0
CA A:TRP138 4.0 0.6 1.0
CB A:TRP138 4.1 0.8 1.0
CG2 A:VAL288 4.2 0.7 1.0
O A:GLY135 4.2 0.6 1.0
OG1 A:THR616 4.3 86.0 1.0
CZ A:ARG669 4.3 0.4 1.0
N A:TRP138 4.3 0.4 1.0
CD1 A:ILE290 4.5 0.3 1.0
CG1 A:ILE290 4.6 0.5 1.0
NH2 A:ARG669 4.8 0.7 1.0
CE2 A:TRP138 5.0 0.2 1.0

Reference:

C.C.Su, F.Long, H.T.Lei, J.R.Bolla, S.V.Do, K.R.Rajashankar, E.W.Yu. Charged Amino Acids (R83, E567, D617, E625, R669, and K678) of Cusa Are Required For Metal Ion Transport in the Cus Efflux System. J.Mol.Biol. V. 422 429 2012.
ISSN: ISSN 0022-2836
PubMed: 22683351
DOI: 10.1016/J.JMB.2012.05.038
Page generated: Fri Sep 4 08:31:02 2020
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