Atomistry » Copper » PDB 3iea-3mn0 » 3jt2
Atomistry »
  Copper »
    PDB 3iea-3mn0 »
      3jt2 »

Copper in PDB 3jt2: Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin

Protein crystallography data

The structure of Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin, PDB code: 3jt2 was solved by Y.G.Gao, H.Robinson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.270, 49.880, 105.140, 90.00, 90.00, 90.00
R / Rfree (%) 22.4 / 28.8

Copper Binding Sites:

The binding sites of Copper atom in the Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin (pdb code 3jt2). This binding sites where shown within 5.0 Angstroms radius around Copper atom.
In total 2 binding sites of Copper where determined in the Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin, PDB code: 3jt2:
Jump to Copper binding site number: 1; 2;

Copper binding site 1 out of 2 in 3jt2

Go back to Copper Binding Sites List in 3jt2
Copper binding site 1 out of 2 in the Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 1 of Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cu129

b:30.7
occ:1.00
ND1 A:HIS117 2.0 31.4 1.0
ND1 A:HIS46 2.0 31.9 1.0
SG A:CYS112 2.0 34.5 1.0
O A:GLY45 2.3 33.7 1.0
CE1 A:HIS46 2.7 28.7 1.0
CE1 A:HIS117 2.9 33.0 1.0
CG A:HIS117 3.0 33.6 1.0
CG A:HIS46 3.2 35.9 1.0
CB A:CYS112 3.3 24.6 1.0
CA A:HIS46 3.4 27.8 1.0
C A:GLY45 3.4 30.7 1.0
CB A:HIS117 3.5 38.7 1.0
CB A:HIS46 3.7 35.1 1.0
CB A:PHE114 3.8 30.7 1.0
N A:HIS46 3.8 28.0 1.0
NE2 A:HIS46 3.9 30.2 1.0
NE2 A:HIS117 4.0 30.6 1.0
CD2 A:HIS117 4.1 29.5 1.0
CD1 A:LEU121 4.2 29.0 1.0
CD2 A:HIS46 4.2 31.3 1.0
C A:HIS46 4.6 32.2 1.0
CD2 A:LEU121 4.6 37.3 1.0
N A:SER47 4.6 33.6 1.0
CG A:PHE114 4.6 33.7 1.0
CA A:CYS112 4.7 30.6 1.0
CA A:GLY45 4.7 31.0 1.0
O A:MET44 4.7 34.3 1.0
N A:PHE114 4.7 32.7 1.0
CG A:LEU121 4.8 38.3 1.0
CA A:PHE114 4.9 31.8 1.0
N A:GLY45 4.9 33.3 1.0
C A:MET44 4.9 36.7 1.0
CA A:HIS117 5.0 39.0 1.0

Copper binding site 2 out of 2 in 3jt2

Go back to Copper Binding Sites List in 3jt2
Copper binding site 2 out of 2 in the Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin


Mono view


Stereo pair view

A full contact list of Copper with other atoms in the Cu binding site number 2 of Cu(II) N47S/M121L Variant of Pseudomonas Aeruginosa Azurin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cu129

b:28.1
occ:1.00
ND1 B:HIS117 2.0 32.4 1.0
ND1 B:HIS46 2.0 31.8 1.0
SG B:CYS112 2.0 36.2 1.0
O B:GLY45 2.3 35.0 1.0
CE1 B:HIS46 2.7 29.8 1.0
CE1 B:HIS117 2.9 32.7 1.0
CG B:HIS117 3.0 32.9 1.0
CG B:HIS46 3.2 36.7 1.0
CB B:CYS112 3.3 24.3 1.0
CA B:HIS46 3.3 28.4 1.0
C B:GLY45 3.4 31.1 1.0
CB B:HIS117 3.5 38.3 1.0
CB B:PHE114 3.7 30.6 1.0
CB B:HIS46 3.7 34.3 1.0
N B:HIS46 3.8 29.1 1.0
CD1 B:LEU121 3.8 29.4 1.0
NE2 B:HIS46 3.9 30.2 1.0
NE2 B:HIS117 4.0 30.9 1.0
CD2 B:HIS117 4.1 28.2 1.0
CD2 B:HIS46 4.2 32.2 1.0
CD2 B:LEU121 4.3 37.7 1.0
C B:HIS46 4.5 33.0 1.0
CG B:LEU121 4.6 37.7 1.0
N B:SER47 4.6 33.0 1.0
CG B:PHE114 4.6 33.6 1.0
N B:PHE114 4.7 32.2 1.0
CA B:CYS112 4.7 29.4 1.0
CA B:GLY45 4.7 31.7 1.0
CA B:PHE114 4.8 32.4 1.0
N B:GLY45 4.9 33.1 1.0
CA B:HIS117 5.0 39.5 1.0

Reference:

N.M.Marshall, D.K.Garner, T.D.Wilson, Y.G.Gao, H.Robinson, M.J.Nilges, Y.Lu. Rationally Tuning the Reduction Potential of A Single Cupredoxin Beyond the Natural Range. Nature V. 462 113 2009.
ISSN: ISSN 0028-0836
PubMed: 19890331
DOI: 10.1038/NATURE08551
Page generated: Sun Dec 13 11:10:17 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy